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5D4B

Structural basis for a new templated activity by terminal deoxynucleotidyl transferase: implications for v(d)j recombination

PDB DOI: 10.2210/pdb5d4b/pdb

Classification: TRANSFERASE
Organism(s): Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-08-07
Deposition Author(s): Delarue, M. , Loc'H, J. , Rosario, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.66 Å

5d4b
Literature

Structural basis for a new templated activity by terminal deoxynucleotidyl transferase: implications for v(d)j recombination

Delarue, M. , Loc'H, J. , Rosario, S.

Primary Citation of Related Structures: 5D4B


Proteins
Molecule Chains Sequence Length Organism Sequence
Terminal deoxynucleotidyltransferase A 400 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSSGLVPRGSHMSPSPVPGSQNVPAPAVKKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDTEGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKAGFLYYEDLVSCVNRPEAEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWTGSRQFERDLRRYATHERKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNA
Terminal deoxynucleotidyltransferase B 400 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSSGLVPRGSHMSPSPVPGSQNVPAPAVKKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDTEGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKAGFLYYEDLVSCVNRPEAEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWTGSRQFERDLRRYATHERKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*AP*AP*AP*C)-3') c 6 NA AAAAAC
DNA (5'-D(*AP*AP*AP*AP*AP*C)-3') d 6 NA AAAAAC
DNA (5'-D(*AP*AP*AP*AP*AP*C)-3') e 6 NA AAAAAC
DNA (5'-D(*TP*TP*TP*TP*TP*GP*G)-3') f 7 NA TTTTTGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-08-07
Deposition Author(s): Delarue, M. , Loc'H, J. , Rosario, S.