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FASTA Sequence PDB Format mmCIF Format
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5CPK

Nucleosome containing methylated sat2l dna

PDB DOI: 10.2210/pdb5cpk/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2015-07-21
Deposition Author(s): Adachi, F. , Arimura, Y. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.632 Å

Literature

Nucleosome containing methylated sat2l dna

Adachi, F. , Arimura, Y. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A.

Primary Citation of Related Structures: 5CPK


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 139 Homo Sapiens , Synthetic Construct GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 139 Homo Sapiens , Synthetic Construct GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 106 Homo Sapiens , Synthetic Construct GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Homo Sapiens , Synthetic Construct GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 133 Homo Sapiens , Synthetic Construct GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 133 Homo Sapiens , Synthetic Construct GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-J D 129 Homo Sapiens , Synthetic Construct GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 129 Homo Sapiens , Synthetic Construct GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (145-MER) i 145 NA ATCATGGAATCATTGAATGGAAATGAATGGAATCATTGGTTGGACTCAAATGGAATTTTCGAACAGGCTCAAATGGAATCTTCGAATGGATTCGAATGTAATCATTTTCGAATGGATTCGAATGGAATCTTCGAATGGAAATGAT
DNA (145-MER) j 145 NA ATCATTTCCATTCGAAGATTCCATTCGAATCCATTCGAAAATGATTACATTCGAATCCATTCGAAGATTCCATTTGAGCCTGTTCGAAAATTCCATTTGAGTCCAACCAATGATTCCTCTCATTTCCATTCAATGATTCCATGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-07-21
Deposition Author(s): Adachi, F. , Arimura, Y. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A.