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5CO8

Crystal structure of the holliday junction-resolving enzyme gen1 (wt) in complex with product dna and mg2+ ion

PDB DOI: 10.2210/pdb5co8/pdb

Classification: HYDROLASE
Organism(s): Rubrivivax Gelatinosus Il144 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-07-20
Deposition Author(s): Declais, A.C. , Freeman, A.D.J. , Gartner, A. , Lilley, D.M.J. , Liu, Y.J. , Wilson, T.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

5co8
Literature

Crystal structure of the holliday junction-resolving enzyme gen1 (wt) in complex with product dna and mg2+ ion

Declais, A.C. , Freeman, A.D.J. , Gartner, A. , Lilley, D.M.J. , Liu, Y.J. , Wilson, T.J.

Primary Citation of Related Structures: 5CO8


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (31-MER) r 31 NA TTCCAACCACCGCTCAACTCAACTGCAGTCT
DNA (5'-D(*AP*GP*AP*CP*TP*GP*CP*AP*GP*TP*TP*GP*AP*GP*TP*C)-3') x 16 NA AGACTGCAGTTGAGTC
DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*A)-3') h 15 NA TGAGCGGTGGTTGGA

Proteins
Molecule Chains Sequence Length Organism Sequence
Nuclease-like protein C 464 Rubrivivax Gelatinosus Il144 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GIKGIYKEIGSGERISLCKLAIDHLEQHNRPLRLAIDMAIWQFQIQAARGGSNPAIRTLFYRFVRLLSLGIHPIFVFDGPNKPIFKRNRRSGTGNGVSTAMAKRLIRLFGFTAHDAPGEAEAECAYLEQQGIVDAVLSEDVDTIMFGSRVTLRDWSSEGSKGGPPTHVTLHDAKKIAEGPSGLDREGMVLVALMSGGDYLPDGIPGCGIKVACQAAKAGFGKELCRIKRADKEAITEWKQRLLHELRTNESGFFRTKHKALEIPENFPNMEVLRYYTHPVVSSPATIERLRQEFPPSSTVDIAGLREFTRETFDWTFRPGAIKLIKVLAPGLLVQRCLDRYVSGPRIDDPDLKKKEESTLVKGISMRREHFSTDATPELRVSFIPAELVGLDPGQEPEVQVEAFGRSGLALNSDDEFDEDISSSQKAPKKPFDPWQPDLAWVPETILKLGVPVTVEDWEEGQRS
Nuclease-like protein A 464 Rubrivivax Gelatinosus Il144 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GIKGIYKEIGSGERISLCKLAIDHLEQHNRPLRLAIDMAIWQFQIQAARGGSNPAIRTLFYRFVRLLSLGIHPIFVFDGPNKPIFKRNRRSGTGNGVSTAMAKRLIRLFGFTAHDAPGEAEAECAYLEQQGIVDAVLSEDVDTIMFGSRVTLRDWSSEGSKGGPPTHVTLHDAKKIAEGPSGLDREGMVLVALMSGGDYLPDGIPGCGIKVACQAAKAGFGKELCRIKRADKEAITEWKQRLLHELRTNESGFFRTKHKALEIPENFPNMEVLRYYTHPVVSSPATIERLRQEFPPSSTVDIAGLREFTRETFDWTFRPGAIKLIKVLAPGLLVQRCLDRYVSGPRIDDPDLKKKEESTLVKGISMRREHFSTDATPELRVSFIPAELVGLDPGQEPEVQVEAFGRSGLALNSDDEFDEDISSSQKAPKKPFDPWQPDLAWVPETILKLGVPVTVEDWEEGQRS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-07-20
Deposition Author(s): Declais, A.C. , Freeman, A.D.J. , Gartner, A. , Lilley, D.M.J. , Liu, Y.J. , Wilson, T.J.