5CLV
Crystal structure of kora-operator dna complex (kora-oa)
PDB DOI: 10.2210/pdb5clv/pdb
Classification: TRANSCRIPTION Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2015-07-16 Deposition Author(s): Hyde, E.I. , Rajasekar, K.V. , White, S.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.5 Å
Crystal structure of kora-operator dna complex (kora-oa)
Hyde, E.I. , Rajasekar, K.V. , White, S.A.
Primary Citation of Related Structures: 5CLV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| TrfB transcriptional repressor protein | A | 96 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKNLPEGYARVTAVLPEHQAYIVRKWEADAKKKQ |
| TrfB transcriptional repressor protein | B | 96 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKNLPEGYARVTAVLPEHQAYIVRKWEADAKKKQ |
| TrfB transcriptional repressor protein | E | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| TrfB transcriptional repressor protein | F | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| TrfB transcriptional repressor protein | I | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| TrfB transcriptional repressor protein | J | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| TrfB transcriptional repressor protein | M | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| TrfB transcriptional repressor protein | N | 65 | Escherichia Coli , Synthetic Construct | KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKN |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | c | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | d | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | g | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | h | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | k | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | l | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | o | 20 | NA | CCAAGTTTAGCTAAACTTGG |
| 5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3' | p | 20 | NA | CCAAGTTTAGCTAAACTTGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-07-16 Deposition Author(s): Hyde, E.I. , Rajasekar, K.V. , White, S.A.