PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5CLB

Alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer a)

PDB DOI: 10.2210/pdb5clb/pdb

Classification: HYDROLASE/DNA
Organism(s): Bacillus Cereus , Synthetic Construct

Deposited: 2015-07-16
Deposition Author(s): Eichman, B.F. , Mullins, E.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.766 Å

Literature

Alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer a)

Eichman, B.F. , Mullins, E.A.

Primary Citation of Related Structures: 5CLB


Proteins
Molecule Chains Sequence Length Organism Sequence
AlkD A 241 Bacillus Cereus , Synthetic Construct GPVPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDIIQIHTLPDQKDFQIIIRELWDLPEREFQAAALDIMQKYKKHINETHIPFLEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQRAAILFQLKYKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQNNELAPLSKREAIKHIKQNYGINNEKIGETLS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*GP*CP*AP*(DZM)P*AP*CP*C)-3') b 9 NA AAGCAAACC
DNA (5'-D(*TP*GP*GP*TP*TP*TP*GP*CP*T)-3') c 9 NA TGGTTTGCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-07-16
Deposition Author(s): Eichman, B.F. , Mullins, E.A.