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5CG9
Ngtet1 in complex with 5mc dna in space group p3221
PDB DOI: 10.2210/pdb5cg9/pdb
Classification: OXIDOREDUCTASE/DNA Organism(s): Naegleria Gruberi , Synthetic Construct
Deposited: 2015-07-09 Deposition Author(s): Cheng, X. , Dai, N. , Hashimoto, H. , Pais, J.E. , Zhang, X. , Zheng, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.693 Å
Ngtet1 in complex with 5mc dna in space group p3221
Cheng, X. , Dai, N. , Hashimoto, H. , Pais, J.E. , Zhang, X. , Zheng, Y.
Primary Citation of Related Structures: 5CG9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Tet-like dioxygenase | A | 267 | Naegleria Gruberi , Synthetic Construct | HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK |
| Tet-like dioxygenase | D | 267 | Naegleria Gruberi , Synthetic Construct | HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3') | b | 11 | NA | CATGCGCTGAC |
| DNA (5'-D(P*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3') | e | 11 | NA | CATGCGCTGAC |
| DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3') | c | 13 | NA | TGTCAGCGCATGG |
| DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3') | f | 13 | NA | TGTCAGCGCATGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-07-09 Deposition Author(s): Cheng, X. , Dai, N. , Hashimoto, H. , Pais, J.E. , Zhang, X. , Zheng, Y.