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5C8E

Crystal structure of thermus thermophilus carh bound to adenosylcobalamin and a 26-bp dna segment

PDB DOI: 10.2210/pdb5c8e/pdb

Classification: Transcription regulator/DNA
Organism(s): Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct

Deposited: 2015-06-25
Deposition Author(s): Drennan, C.L. , Jost, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.89 Å

5c8e
Literature

Crystal structure of thermus thermophilus carh bound to adenosylcobalamin and a 26-bp dna segment

Drennan, C.L. , Jost, M.

Primary Citation of Related Structures: 5C8E


Proteins
Molecule Chains Sequence Length Organism Sequence
Light-dependent transcriptional regulator CarH A 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH B 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH C 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH D 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH E 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH F 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH G 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
Light-dependent transcriptional regulator CarH H 305 Thermus Thermophilus (Strain Hb27 / Atcc Baa-163 / Dsm 7039) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
26-mer DNA segment containing the CarH operator sequence (antisense strand) i 26 NA ATAGGTTTTGTCAAGCTTTTGTACAT
26-mer DNA segment containing the CarH operator sequence (antisense strand) k 26 NA ATAGGTTTTGTCAAGCTTTTGTACAT
26-mer DNA segment containing the CarH operator sequence (sense strand) j 26 NA ATGTACAAAAGCTTGACAAAACCTAT
26-mer DNA segment containing the CarH operator sequence (sense strand) l 26 NA ATGTACAAAAGCTTGACAAAACCTAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-06-25
Deposition Author(s): Drennan, C.L. , Jost, M.