5C3L
Structure of the metazoan nup62.nup58.nup54 nucleoporin complex.
PDB DOI: 10.2210/pdb5c3l/pdb
Classification: TRANSPORT PROTEIN Organism(s): Camelus Dromedarius , Xenopus Laevis
Deposited: 2015-06-17 Deposition Author(s): Chug, H. , Gorlich, D. , Hulsmann, B.B. , Pleiner, T. , Trakhanov, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Structure of the metazoan nup62.nup58.nup54 nucleoporin complex.
Chug, H. , Gorlich, D. , Hulsmann, B.B. , Pleiner, T. , Trakhanov, S.
Primary Citation of Related Structures: 5C3L
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nup54 | A | 333 | Camelus Dromedarius , Xenopus Laevis | GSMGTINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGFFMNNTPPVEFTQENPFCRFKAVGFSYIPNNKDEDGLISLIFNKKESDIRGQQQQLVESLHKVLGGHQTLTVNVEGVKTKADNQTEVIIYVVERSPNGTSRRVGASALFSYFEQAHIKANMQQLGVTGAMAQTELSPVQIKQLIQNPLSGVDPIIWEQAKVDNPDPERLIPVPMIGFKELLRRLEVQDQMTKQHQSRLDIISEDIGELQKNQTTTMAKIGQYKRKLMELSHRVLQVLIKQEIQRKSGFAIQAEEEQLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFG |
| Nucleoporin Nup58 | B | 142 | Camelus Dromedarius , Xenopus Laevis | AGTRPEDSKALKDENLPQLLCQDVENFQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVASSGLQRNALAIDKLKIETAEELKNAEIALRTQKTPPGLQHENTAPADYFHTLVQQFEVQLQQYRQQIEELENHLAT |
| Nucleoporin Nup62 | C | 150 | Camelus Dromedarius , Xenopus Laevis | AGTAAATGISTATAMTYAQLENLINKWSLELEDQEKHFLQQATQVNAWDRTLMQNGERITTLHREMEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKEVIEHLNTSAG |
| Nanobody Nb15 | D | 119 | Camelus Dromedarius , Xenopus Laevis | AGTASQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYAMSWVRQAPGKGLEVVSDIGSGGDRITYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCANQYGRGPGTQVTVSSGS |
| Part of Nup54 N-terminus with weak electron density, built as poly-alanine. | H | 14 | Camelus Dromedarius , Xenopus Laevis | XXXXXXXXXXXXXX |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-06-17 Deposition Author(s): Chug, H. , Gorlich, D. , Hulsmann, B.B. , Pleiner, T. , Trakhanov, S.