PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5BTL

Crystal structure of a topoisomerase ii complex

PDB DOI: 10.2210/pdb5btl/pdb

Classification: Isomerase/DNA
Organism(s): Mycobacterium Tuberculosis (Strain Atcc 25618 / H37Rv) , Mycobacterium Tuberculosis (Strain Cdc 1551 / Oshkosh) , Synthetic Construct

Deposited: 2015-06-03
Deposition Author(s): Berger, J.M. , Blower, T.R. , Kerns, R.J. , Williamson, B.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

5btl
Literature

Crystal structure of a topoisomerase ii complex

Berger, J.M. , Blower, T.R. , Kerns, R.J. , Williamson, B.H.

Primary Citation of Related Structures: 5BTL


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA gyrase subunit A A 503 Mycobacterium Tuberculosis (Strain Atcc 25618 / H37Rv) , Mycobacterium Tuberculosis (Strain Cdc 1551 / Oshkosh) , Synthetic Construct TDTTLPPDDSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIRMRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAIGSG
DNA gyrase subunit A C 503 Mycobacterium Tuberculosis (Strain Atcc 25618 / H37Rv) , Mycobacterium Tuberculosis (Strain Cdc 1551 / Oshkosh) , Synthetic Construct TDTTLPPDDSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIRMRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAIGSG
DNA gyrase subunit B B 253 Mycobacterium Tuberculosis (Strain Atcc 25618 / H37Rv) , Mycobacterium Tuberculosis (Strain Cdc 1551 / Oshkosh) , Synthetic Construct SNALVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV
DNA gyrase subunit B D 253 Mycobacterium Tuberculosis (Strain Atcc 25618 / H37Rv) , Mycobacterium Tuberculosis (Strain Cdc 1551 / Oshkosh) , Synthetic Construct SNALVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA substrate 24-mer GGTCATGAATGACTATGCACGTAA e 24 NA GGTCATGAATGACTATGCACGTAA
DNA substrate 24-mer GGTCATGAATGACTATGCACGTAA h 24 NA GGTCATGAATGACTATGCACGTAA
DNA substrate 24-mer TTACGTGCATAGTCATTCATGACC f 24 NA TTACGTGCATAGTCATTCATGACC
DNA substrate 24-mer TTACGTGCATAGTCATTCATGACC g 24 NA TTACGTGCATAGTCATTCATGACC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-06-03
Deposition Author(s): Berger, J.M. , Blower, T.R. , Kerns, R.J. , Williamson, B.H.