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5BKL

Crystallographic structure of the cubic crystal form of stmv (77.9 degree rotation) grown from nacl

PDB DOI: 10.2210/pdb5bkl/pdb

Classification: VIRUS/RNA
Organism(s): Satellite Tobacco Mosaic Virus

Deposited: 2021-03-20
Deposition Author(s): Mcpherson, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.94 Å

5bkl
Literature

Crystallographic structure of the cubic crystal form of stmv (77.9 degree rotation) grown from nacl

Mcpherson, A.

Primary Citation of Related Structures: 5BKL


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') a 11 NA AAAAAAAAAAA
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') e 13 NA UUUUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') h 13 NA UUUUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') i 13 NA UUUUUUUUUUUUU
RNA (5'-R(UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') m 11 NA UUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') n 13 NA UUUUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') kk 13 NA UUUUUUUUUUUUU
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') p 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') s 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') t 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') v 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') x 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') uu 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') bb 12 NA AAAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') y 11 NA AAAAAAAAAAA
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') tt 11 NA AAAAAAAAAAA
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') ww 13 NA UUUUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') ll 13 NA UUUUUUUUUUUUU
RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') qq 13 NA UUUUUUUUUUUUU

Proteins
Molecule Chains Sequence Length Organism Sequence
Coat protein B 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein C 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein D 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein F 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein G 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein J 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein K 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein L 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein O 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein GG 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein HH 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein II 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Coat protein JJ 159 Satellite Tobacco Mosaic Virus MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-03-20
Deposition Author(s): Mcpherson, A.