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5B8C

High resolution structure of the human pd-1 in complex with pembrolizumab fv

PDB DOI: 10.2210/pdb5b8c/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens

Deposited: 2016-06-14
Deposition Author(s): Horita, S. , Iwata, S. , Nomura, N. , Shimamura, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.146 Å

5b8c
Literature

High resolution structure of the human pd-1 in complex with pembrolizumab fv

Horita, S. , Iwata, S. , Nomura, N. , Shimamura, T.

Primary Citation of Related Structures: 5B8C


Proteins
Molecule Chains Sequence Length Organism Sequence
Pembrolizumab light chain variable region (PemVL) A 119 Homo Sapiens EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIKTSENLYFQ
Pembrolizumab light chain variable region (PemVL) D 119 Homo Sapiens EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIKTSENLYFQ
Pembrolizumab light chain variable region (PemVL) G 119 Homo Sapiens EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIKTSENLYFQ
Pembrolizumab light chain variable region (PemVL) J 119 Homo Sapiens EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIKTSENLYFQ
Pembrolizumab heavy chain variable region (PemVH) B 120 Homo Sapiens QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS
Pembrolizumab heavy chain variable region (PemVH) E 120 Homo Sapiens QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS
Pembrolizumab heavy chain variable region (PemVH) H 120 Homo Sapiens QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS
Pembrolizumab heavy chain variable region (PemVH) K 120 Homo Sapiens QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS
Programmed cell death protein 1 C 139 Homo Sapiens GSWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTERRAEVPTAHPSPSPTSENLYFQ
Programmed cell death protein 1 F 139 Homo Sapiens GSWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTERRAEVPTAHPSPSPTSENLYFQ
Programmed cell death protein 1 I 139 Homo Sapiens GSWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTERRAEVPTAHPSPSPTSENLYFQ
Programmed cell death protein 1 L 139 Homo Sapiens GSWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTERRAEVPTAHPSPSPTSENLYFQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-14
Deposition Author(s): Horita, S. , Iwata, S. , Nomura, N. , Shimamura, T.