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FASTA Sequence PDB Format mmCIF Format
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5B5E

Crystal structure analysis of photosystem ii complex

PDB DOI: 10.2210/pdb5b5e/pdb

Classification: ELECTRON TRANSPORT, PHOTOSYNTHESIS
Organism(s): Thermosynechococcus Vulcanus

Deposited: 2016-05-02
Deposition Author(s): Fukushima, Y. , Kamiya, N. , Tanaka, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.87 Å

5b5e
Literature

Crystal structure analysis of photosystem ii complex

Fukushima, Y. , Kamiya, N. , Tanaka, A.

Primary Citation of Related Structures: 5B5E


Proteins
Molecule Chains Sequence Length Organism Sequence
Photosystem II protein D1 A 344 Thermosynechococcus Vulcanus MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDIDGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFLLGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFAALGISTMAFNLNGFNFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLA
Photosystem II reaction center protein K K 37 Thermosynechococcus Vulcanus KLPEAYAIFDPLVDVLPVIPVLFLALAFVWQAAVGFR
Photosystem II reaction center protein L L 37 Thermosynechococcus Vulcanus MEPNPNRQPVELNRTSLYLGLLLILVLALLFSSYFFN
Photosystem II reaction center protein M M 36 Thermosynechococcus Vulcanus MEVNQLGLIATALFVLVPSVFLIILYVQTESQQKSS
Photosystem II manganese-stabilizing polypeptide O 244 Thermosynechococcus Vulcanus QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALPQAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIEPA
Photosystem II reaction center protein T T 32 Thermosynechococcus Vulcanus METITYVFIFACIIALFFFAIFFREPPRITKK
Photosystem II 12 kDa extrinsic protein U 104 Thermosynechococcus Vulcanus ATASTEEELVNVVDEKLGTAYGEKIDLNNTNIAAFIQYRGLYPTLAKLIVKNAPYESVEDVLNIPGLTERQKQILRENLEHFTVTEVETALVEGGDRYNNGLYK
Cytochrome c-550 V 137 Thermosynechococcus Vulcanus AELTPEVLTVPLNSEGKTITLTEKQYLEGKRLFQYACASCHVGGITKTNPSLDLRTETLALATPPRDNIEGLVDYMKNPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKWGGGKVYY
Photosystem II reaction center protein Ycf12 Y 30 Thermosynechococcus Vulcanus EVIAQLTMIAMIGIAGPMIIFLLAVRRGNL
Photosystem II reaction center protein X X 40 Thermosynechococcus Vulcanus TITPSLKGFFIGLLSGAVVLGLTFAVLIAISQIDKVQRSL
Photosystem II reaction center protein Z Z 62 Thermosynechococcus Vulcanus MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALVLVVGVLNFFVV
Photosystem II CP47 reaction center protein B 505 Thermosynechococcus Vulcanus GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYELATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSITGETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLELFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGLFGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAHHIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQQEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAKGGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPAFFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSFYGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDGIFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSGIDPELSPEQVEWGFYQKVGDVTTRK
Photosystem II CP43 reaction center protein C 455 Thermosynechococcus Vulcanus NSIFATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPSLD
Photosystem II D2 protein D 342 Thermosynechococcus Vulcanus ERGWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGNAL
Cytochrome b559 subunit alpha E 83 Thermosynechococcus Vulcanus AGTTGERPFSDIITSVRYWVIHSITIPALFIAGWLFVSTGLAYDVFGTPRPDSYYAQEQRSIPLVTDRFEAKQQVETFLEQLK
Cytochrome b559 subunit beta F 44 Thermosynechococcus Vulcanus TSNTPNQEPVSYPIFTVRWVAVHTLAVPTIFFLGAIAAMQFIQR
Photosystem II reaction center protein H H 65 Thermosynechococcus Vulcanus ARRTWLGDILRPLNSEYGKVAPGWGTTPLMAVFMGLFLVFLLIILEIYNSTLILDGVNVSWKALG
Photosystem II reaction center protein I I 38 Thermosynechococcus Vulcanus METLKITVYIVVTFFVLLFVFGFLSGDPARNPKRKDLE
Photosystem II reaction center protein J J 40 Thermosynechococcus Vulcanus MMSEGGRIPLWIVATVAGMGVIVIVGLFFYGAYAGLGSSL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-05-02
Deposition Author(s): Fukushima, Y. , Kamiya, N. , Tanaka, A.