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FASTA Sequence PDB Format mmCIF Format
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5B2P

Crystal structure of francisella novicida cas9 in complex with sgrna and target dna (tga pam)

PDB DOI: 10.2210/pdb5b2p/pdb

Classification: HYDROLASE/RNA/DNA
Organism(s): Francisella Tularensis Subsp. Novicida U112 , Synthetic Construct

Deposited: 2016-02-01
Deposition Author(s): Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.7 Å

Literature

Crystal structure of francisella novicida cas9 in complex with sgrna and target dna (tga pam)

Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O.

Primary Citation of Related Structures: 5B2P


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 1632 Francisella Tularensis Subsp. Novicida U112 , Synthetic Construct GSHMNFKILPIAIDLGVKNTGVFSAFYQKGTSLERLDNKNGKVYELSKDSYTLLMNNRTARRHQRRGIDRKQLVKRLFKLIWTEQLNLEWDKDTQQAISFLFNRRGFSFITDGYSPEYLNIVPEQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNKLMQKILEFKLMKLCTDIKDDKVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFLKRHATINDRILDTLLTDDLDIWNFNFEKFDFDKNEEKLQNQEDKDHIQAHLHHFVFAVNKIKSEMASGGRHRSQYFQEITNVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLIGNLSNLELKPLRKYFNDKIHAKADHWDEQKFTETYCHWILGEWRVGVKDQDKKDGAKYSYKDLCNELKQKVTKAGLVDFLLELDPCRTIPPYLDNNNRKPPKCQSLILNPKFLDNQYPNWQQYLQELKKLQSIQNYLDSFETDLKVLKSSKDQPYFVEYKSSNQQIASGQRDYKDLDARILQFIFDRVKASDELLLNEIYFQAKKLKQKASSELEKLESSKKLDEVIANSQLSQILKSQHTNGIFEQGTFLHLVCKYYKQRQRARDSRLYIMPEYRYDKKLHKYNNTGRFDDDNQLLTYCNHKPRQKRYQLLNDLAGVLQVSPNFLKDKIGSDDDLFISKWLVEHIRGFKKACEDSLKIQKDNRGLLNHKINIARNTKGKCEKEIFNLICKIEGSEDKKGNYKHGLAYELGVLLFGEPNEASKPEFDRKIKKFNSIYSFAQIQQIAFAERKGNANTCAVCSADNAHRMQQIKITEPVEDNKDKIILSAKAQRLPAIPTRIVDGAVKKMATILAKNIVDDNWQNIKQVLSAKHQLHIPIITESNAFEFEPALADVKGKSLKDRRKKALERISPENIFKDKNNRIKEFAKGISAYSGANLTDGDFDGAKEELDHIIPRSHKKYGTLNDEANLICVTRGDAKNKGNRIFCLRDLADNYKLKQFETTDDLEIEKKIADTIWDANKKDFKFGNYRSFINLTPQEQKAFRHALFLADENPIKQAVIRAINNRNRTFVNGTQRYFAEVLANNIYLRAKKENLNTDKISFDYFGIPTIGNGRGIAEIRQLYEKVDSDIQAYAKGDKPQASYSHLIDAMLAFCIAADEHRNDGSIGLEIDKNYSLYPLDKNTGEVFTKDIFSQIKITDNEFSDKKLVRKKAIEGFNTHRQMTRDGIYAENYLPILIHKELNEVRKGYTWKNSEEIKIFKGKKYDIQQLNNLVYCLKFVDKPISIDIQISTLEELRNILTTNNIAATAEYYYINLKTQKLHEYYIENYNTALGYKKYSKEMEFLRSLAYRSERVKIKSIDDVKQVLDKDSNFIIGKITLPFKKEWQRLYREWQNTTIKDDYEFLKSFFNVKSITKLHKKVRKDFSLPISTNEGKFLVKRKTWDNNFIYQILNDSDSRADGTKPFIPAFDISKNEIVEAIIDSFTSKNIFWLPKNIELQKVDNKNIFAIDTSKWFEVETPSDLRDIGIATIQYKIDNNSRPKVRVKLDYVIDDDSKINYFMNHSLLKSRYPDKVLEILKQSTIIEFESSGFNKTIKEMLGMKLAGIYNETSNN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Guide RNA b 94 NA GGGAAAUUAGGUGCGCUGGGGGUUUCAGUUGCGCCGAAAGGCGCUCUGUAAUCAUUAAAAAGUAUUUUGAACGGACCUCUGUUUGACACGUCUG
Target DNA c 30 NA CCGATATCACCCCAGCGCACCTAATTTCCC
DNA (5'-D(*TP*GP*AP*TP*AP*TP*CP*GP*G)-3') d 9 NA TGATATCGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-02-01
Deposition Author(s): Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O.