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FASTA Sequence PDB Format mmCIF Format
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5B2I

Human nucleosome containing cpg unmethylated dna

PDB DOI: 10.2210/pdb5b2i/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Homo Sapiens

Deposited: 2016-01-16
Deposition Author(s): Fujii, Y. , Umehara, T. , Wakamori, M. , Yokoyama, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

Literature

Human nucleosome containing cpg unmethylated dna

Fujii, Y. , Umehara, T. , Wakamori, M. , Yokoyama, S.

Primary Citation of Related Structures: 5B2I


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-J D 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (146-MER) i 146 NA ATCAATATCCACGTGCCAGTTATACCAAAAGTGTATTTGGAAACTCCTAACTGAAAAGGCATGTTCACGTGAATTCACGTGAACATGCCTTTTCAGTTAGGAGTTTCCAAATACACTTTTGGTATAACTGGCACGTGGATATTGAT
DNA (146-MER) j 146 NA ATCAATATCCACGTGCCAGTTATACCAAAAGTGTATTTGGAAACTCCTAACTGAAAAGGCATGTTCACGTGAATTCACGTGAACATGCCTTTTCAGTTAGGAGTTTCCAAATACACTTTTGGTATAACTGGCACGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-01-16
Deposition Author(s): Fujii, Y. , Umehara, T. , Wakamori, M. , Yokoyama, S.