5APM
Multiple capsid-stabilizing protein-rna and protein-protein interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis
PDB DOI: 10.2210/pdb5apm/pdb
Classification: VIRUS Organism(s): Human Parechovirus 3
Deposited: 2015-09-17 Deposition Author(s): Bakker, A.Q. , Beaumont, T. , Butcher, S.J. , Domanska, A. , Koning, R.I. , Koster, A.J. , Matadeen, R. , Shakeel, S. , Westerhuis, B.M. , Wolthers, K.C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.3 Å
Multiple capsid-stabilizing protein-rna and protein-protein interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis
Bakker, A.Q. , Beaumont, T. , Butcher, S.J. , Domanska, A. , Koning, R.I. , Koster, A.J. , Matadeen, R. , Shakeel, S. , Westerhuis, B.M. , Wolthers, K.C.
Primary Citation of Related Structures: 5APM
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| VP1 | A | 198 | Human Parechovirus 3 | QSISPNELGLTSAQDDGPLGNEKPNYFLNFRTMNVDIFTVSHTKVDNIFGRAWYVASHDFNNGDTWRQKLTFPKEGHGMLSQFFAYFTGEINIHILYMAEQGFLRVAHTYDTEDNRKTFLSSNGVITIPAGEQMTLSVPFYSNKPLRTVRHDSALGFLMCRPMMHGTTRTTAEVYISLRCPNFFFPVPAPKPTGSRAA |
| VP3 | B | 237 | Human Parechovirus 3 | TKYKWTRTKVDIAEGPGTMNMANVLSTTGAQSVALVGERAFYDPRTAGSKSRFDDMIKIAQLFSVMSDNTTPSSSSGIDKYGYFDWAATVAPQNMVHRNVVTLDQFPNLNLFMNTYSYFRGSLIIRLSIYASTFNRGRLRMGFFPNCTHDTQLELDNAIYTICDIGSDNSFELTIPYSFSTWMRKTHGHQLGLFQVEVLNRLTYNSSSPNKVHCIVQGRLGDDAKFFCPTGSLVSFQ |
| VP0 | C | 263 | Human Parechovirus 3 | LSNVETEANNIISGNEVGGEIITKVADDASNLLGPNSFATTAQPENKDVVQATTTVNTTNLTQHPSAPTIPFTPDFRNVDNFHSMAYDITTGDKNPSKLIRLDTASWQTSYSRQYKITTVELPKSFWDDTRKPAYGQAKYFAAVRCGFHFQVQVNVNQGTAGSALVVYEPKPVIDSRQYLEFGSLTNLPHVLMNLAETTQADLCIPYVADTNYVKTDSSDLGQLRVYVWTPLSVPTGASNEVDVTVMGSLLQLDFQNPRPYGE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2015-09-17 Deposition Author(s): Bakker, A.Q. , Beaumont, T. , Butcher, S.J. , Domanska, A. , Koning, R.I. , Koster, A.J. , Matadeen, R. , Shakeel, S. , Westerhuis, B.M. , Wolthers, K.C.