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5AOX

Human alu rna retrotransposition complex in the ribosome-stalling conformation

PDB DOI: 10.2210/pdb5aox/pdb

Classification: TRANSLATION
Organism(s): Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-09-12
Deposition Author(s): Ahl, V. , Weichenrieder, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.04 Å

5aox
Literature

Human alu rna retrotransposition complex in the ribosome-stalling conformation

Ahl, V. , Weichenrieder, O.

Primary Citation of Related Structures: 5AOX


Proteins
Molecule Chains Sequence Length Organism Sequence
SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN A 85 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) PQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVSLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARNVTMETE
SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN D 85 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) PQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVSLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARNVTMETE
SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN B 94 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLK
SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN E 94 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
ALU JO CONSENSUS RNA c 87 NA GGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGAGGAUCGCGAACACGCGAGACCCCGUCUCUA
ALU JO CONSENSUS RNA f 87 NA GGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGAGGAUCGCGAACACGCGAGACCCCGUCUCUA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-09-12
Deposition Author(s): Ahl, V. , Weichenrieder, O.