5A3I
Crystal structure of a complex formed between fld194 fab and transmissible mutant h5 haemagglutinin
PDB DOI: 10.2210/pdb5a3i/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1))
Deposited: 2015-06-01 Deposition Author(s): Calder, L.J. , Collins, P.J. , Corti, D. , Foglierini, M. , Gamblin, S.J. , Lanzavecchia, A. , Lin, Y.P. , Liu, J. , Martin, S.R. , Monne, I. , Pinna, D. , Santos, C. , Skehel, J.J. , Subbarao, K. , Suguitan Jr, A.L. , Temperton, N.J. , Walker, P.A. , Xiong, X.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.89 Å
Crystal structure of a complex formed between fld194 fab and transmissible mutant h5 haemagglutinin
Calder, L.J. , Collins, P.J. , Corti, D. , Foglierini, M. , Gamblin, S.J. , Lanzavecchia, A. , Lin, Y.P. , Liu, J. , Martin, S.R. , Monne, I. , Pinna, D. , Santos, C. , Skehel, J.J. , Subbarao, K. , Suguitan Jr, A.L. , Temperton, N.J. , Walker, P.A. , Xiong, X.
Primary Citation of Related Structures: 5A3I
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HEMAGGLUTININ | A | 328 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | DPDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKDSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVKGLSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLAIGLRNSPQRETR |
| HEMAGGLUTININ | E | 328 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | DPDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKDSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVKGLSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLAIGLRNSPQRETR |
| HEMAGGLUTININ | B | 166 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEA |
| ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN | C | 230 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | EVQLVQSGAEVKKPGESLKISCKGSGYSFSDYWIGWVRQMPGEGLEWMGIIYPASSEIRYSPSFQGLVTISRDKSINTASLQWSSLKASDTAIYYCARHASCSARSCYWGPVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN | G | 230 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | EVQLVQSGAEVKKPGESLKISCKGSGYSFSDYWIGWVRQMPGEGLEWMGIIYPASSEIRYSPSFQGLVTISRDKSINTASLQWSSLKASDTAIYYCARHASCSARSCYWGPVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| ANTI-HAEMAGGLUTININ HA1 FAB LIGHT CHAIN | D | 219 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | DIVMTQSPLSLPVSPGEPASISCRSSQSLLHGNGYNYLDWYLQKPGQSPRLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| ANTI-HAEMAGGLUTININ HA1 FAB LIGHT CHAIN | H | 219 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | DIVMTQSPLSLPVSPGEPASISCRSSQSLLHGNGYNYLDWYLQKPGQSPRLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| HEMAGGLUTININ | F | 166 | Homo Sapiens , Influenza A Virus (A/Vietnam/1203/2004(H5N1)) | GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGKEFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-06-01 Deposition Author(s): Calder, L.J. , Collins, P.J. , Corti, D. , Foglierini, M. , Gamblin, S.J. , Lanzavecchia, A. , Lin, Y.P. , Liu, J. , Martin, S.R. , Monne, I. , Pinna, D. , Santos, C. , Skehel, J.J. , Subbarao, K. , Suguitan Jr, A.L. , Temperton, N.J. , Walker, P.A. , Xiong, X.