Crystal structure of isocitrate dehydrogenase in complex with isocitrate and mn from m. smegmatis
PDB DOI: 10.2210/pdb4zda/pdb
Classification: OXIDOREDUCTASE Organism(s): Bovine Enterovirus (Strain Vg-5-27)
Deposited: 2015-04-17 Deposition Author(s): Mckinney, J.D. , Murima, P. , Pojer, F.
Crystal structure of isocitrate dehydrogenase in complex with isocitrate and mn from m. smegmatis
Mckinney, J.D. , Murima, P. , Pojer, F.
Primary Citation of Related Structures: 4ZDA
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Isocitrate dehydrogenase (NADP) Icd2 | A | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Isocitrate dehydrogenase (NADP) Icd2 | B | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Isocitrate dehydrogenase (NADP) Icd2 | C | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Isocitrate dehydrogenase (NADP) Icd2 | D | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Isocitrate dehydrogenase (NADP) Icd2 | E | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Isocitrate dehydrogenase (NADP) Icd2 | F | 767 | Bovine Enterovirus (Strain Vg-5-27) | MSAQQPTIIYTLTDEAPLLATYAFLPVVRKFAEAAGIDVKTSDISVAARILAEFGDHLTEEQRVPDNLGELGALTQDPSANIIKLPNISASVPQLLAAIKELQGKGYNVPDYPANPKTDDEKKIKDRYAKILGSAVNPVLREGNSDRRAPKAVKEYARKHPHSMGEWSQASRTHVATMKTGDFYHGEKSMTLDRDRRVKMVLKTKSGEEIVLKPEVKLDAGDIIDSMYMSKKALIAFYEEQIEDAYKTGVMFSLHVKATMMKVSHPIVFGHAVKVFYKDAFAKHEKLFDELGVNVNNGLSDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISNFHSPSDVIVDASMPAMIRLGGKMYGADGRTKDTKAVNPESTFSRMYQEMINFCKTHGQFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVADIVDIDTGEVLLTQNVEEGDIWRMPIVKDAPIRDWVKLAVTRARLSGMPVVFWLDTERPHEVELRKKVKEYLKDHDTEGLKIQIMPQVWAMRYTLERVVRGKDTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVHQLVEENHLRWDSLGEFLALGASLEDMGNKTGNEKAKVLAKALDTATGKLLEENKSPSRRTGELDNRGSQFYLSLFWAQALAEQTEDAELAERFKPLAKALAEQEEAIVSELNSVQGKTVDIGGYYYPDPEKTSEVMRPSKTFNTTLESVPRYPYDVPDYAKLAAALEHHHHHH |
Method: X-RAY DIFFRACTION
Deposited Date: 2015-04-17 Deposition Author(s): Mckinney, J.D. , Murima, P. , Pojer, F.