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4ZBN

Non-helical dna triplex forms a unique aptamer scaffold for high affinity recognition of nerve growth factor

PDB DOI: 10.2210/pdb4zbn/pdb

Classification: Immune system/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-04-15
Deposition Author(s): Davies, D.R. , Edwards, T.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.447 Å

4zbn
Literature

Non-helical dna triplex forms a unique aptamer scaffold for high affinity recognition of nerve growth factor

Davies, D.R. , Edwards, T.E.

Primary Citation of Related Structures: 4ZBN


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) d 28 NA CAXGAGGACXXGGGGXXXAGCCGXXGXG
DNA (28-MER) e 28 NA CAXGAGGACXXGGGGXXXAGCCGXXGXG

Proteins
Molecule Chains Sequence Length Organism Sequence
Beta-nerve growth factor A 120 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRRA
Beta-nerve growth factor B 120 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRRA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-04-15
Deposition Author(s): Davies, D.R. , Edwards, T.E.