PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4Z7U

S13 complex

PDB DOI: 10.2210/pdb4z7u/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Exiguobacterium Sp. Kkbo11

Deposited: 2015-04-08
Deposition Author(s): Koning, F. , Petersen, J. , Reid, H.H. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

4z7u
Literature

S13 complex

Koning, F. , Petersen, J. , Reid, H.H. , Rossjohn, J.

Primary Citation of Related Structures: 4Z7U


Proteins
Molecule Chains Sequence Length Organism Sequence
MHC class II HLA-DQ-alpha chain A 192 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPETSGDDDDK
MHC class II HLA-DQ-alpha chain C 192 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPETSGDDDDK
MHC class II HLA-DQ-beta-1 B 213 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 GGSIEGRGGSGASRDSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSTGGDDDDK
MHC class II HLA-DQ-beta-1 D 213 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 GGSIEGRGGSGASRDSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSTGGDDDDK
T-CELL RECEPTOR, S13 ALPHA CHAIN E 203 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DAKTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILRDRSNQFYFGTGTSLTVIPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T-CELL RECEPTOR, S13 ALPHA CHAIN G 203 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DAKTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILRDRSNQFYFGTGTSLTVIPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T-CELL RECEPTOR, S13 BETA CHAIN F 245 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSTTPGTGTETQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T-CELL RECEPTOR, S13 BETA CHAIN H 245 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSTTPGTGTETQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
deamidated DQ8-glia-alpha1 peptide I 18 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 APSGEGSFQPSQENPQGS
deamidated DQ8-glia-alpha1 peptide J 18 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 APSGEGSFQPSQENPQGS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-04-08
Deposition Author(s): Koning, F. , Petersen, J. , Reid, H.H. , Rossjohn, J.