4Z5T
The nucleosome containing human h3.5
PDB DOI: 10.2210/pdb4z5t/pdb
Classification: STRUCTURAL PROTEIN/DNA Organism(s): Homo Sapiens
Deposited: 2015-04-03 Deposition Author(s): Harada, A. , Horikoshi, N. , Kagawa, W. , Kimura, H. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A. , Sato, K. , Sato, Y. , Shiraishi, K. , Sugino, N. , Tachiwana, H. , Urahama, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
The nucleosome containing human h3.5
Harada, A. , Horikoshi, N. , Kagawa, W. , Kimura, H. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A. , Sato, K. , Sato, Y. , Shiraishi, K. , Sugino, N. , Tachiwana, H. , Urahama, T.
Primary Citation of Related Structures: 4Z5T
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Histone H3.3C | A | 138 | Homo Sapiens | GSHMARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H3.3C | E | 138 | Homo Sapiens | GSHMARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H4 | B | 106 | Homo Sapiens | GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Histone H4 | F | 106 | Homo Sapiens | GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Histone H2A type 1-B/E | C | 133 | Homo Sapiens | GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK |
| Histone H2A type 1-B/E | G | 133 | Homo Sapiens | GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK |
| Histone H2B type 1-J | D | 129 | Homo Sapiens | GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
| Histone H2B type 1-J | H | 129 | Homo Sapiens | GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (146-MER) | i | 146 | NA | ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT |
| DNA (146-MER) | j | 146 | NA | ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-04-03 Deposition Author(s): Harada, A. , Horikoshi, N. , Kagawa, W. , Kimura, H. , Kurumizaka, H. , Maehara, K. , Ohkawa, Y. , Osakabe, A. , Sato, K. , Sato, Y. , Shiraishi, K. , Sugino, N. , Tachiwana, H. , Urahama, T.