PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4YO0

Crystal structure of monoclonal anti-human podoplanin antibody nz-1 with bound pa peptide

PDB DOI: 10.2210/pdb4yo0/pdb

Classification: IMMUNE SYSTEM
Organism(s): Rattus Norvegicus , Synthetic Construct

Deposited: 2015-03-11
Deposition Author(s): Arimori, T. , Fujii, Y. , Kitago, Y. , Takagi, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.56 Å

4yo0
Literature

Crystal structure of monoclonal anti-human podoplanin antibody nz-1 with bound pa peptide

Arimori, T. , Fujii, Y. , Kitago, Y. , Takagi, J.

Primary Citation of Related Structures: 4YO0


Proteins
Molecule Chains Sequence Length Organism Sequence
Heavy chain of antigen binding fragment, Fab A 238 Rattus Norvegicus , Synthetic Construct MDFRLSLAFLVLLIKGVQCEVQLVESGGGLVQPGRSLKLSCAASGFTFSNYGMAWVRQTPTKGLEWIASISAGGDKTYYGDSVKGRFSISRDNAKTTHYLQMDSLRSEDTATYYCAKTSRVYFDYWGQGVMVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVPREC
Heavy chain of antigen binding fragment, Fab C 238 Rattus Norvegicus , Synthetic Construct MDFRLSLAFLVLLIKGVQCEVQLVESGGGLVQPGRSLKLSCAASGFTFSNYGMAWVRQTPTKGLEWIASISAGGDKTYYGDSVKGRFSISRDNAKTTHYLQMDSLRSEDTATYYCAKTSRVYFDYWGQGVMVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVPREC
Light chain of antigen binding fragment, Fab B 233 Rattus Norvegicus , Synthetic Construct MTWTLLFLAFLHHLTGSCAQFVLTQPNSVSTNLGSTVKLSCKRSTGNIGSNYVNWYQQHEGRSPTTMIYRDDKRPDGVPDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGGTKLTVLGQPKSTPTLTVFPPSTEELQGNKATLVCLISDFYPSDVEVAWKANGAPISQGVDTANPTKQGNKYIASSFLRLTAEQWRSRNSFTCQVTHEGNTVEKSLSPAECV
Light chain of antigen binding fragment, Fab D 233 Rattus Norvegicus , Synthetic Construct MTWTLLFLAFLHHLTGSCAQFVLTQPNSVSTNLGSTVKLSCKRSTGNIGSNYVNWYQQHEGRSPTTMIYRDDKRPDGVPDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGGTKLTVLGQPKSTPTLTVFPPSTEELQGNKATLVCLISDFYPSDVEVAWKANGAPISQGVDTANPTKQGNKYIASSFLRLTAEQWRSRNSFTCQVTHEGNTVEKSLSPAECV
PA14 peptide E 14 Rattus Norvegicus , Synthetic Construct EGGVAMPGAEDDVV
PA14 peptide F 14 Rattus Norvegicus , Synthetic Construct EGGVAMPGAEDDVV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-03-11
Deposition Author(s): Arimori, T. , Fujii, Y. , Kitago, Y. , Takagi, J.