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4YNQ

Trex1-dsdna complex

PDB DOI: 10.2210/pdb4ynq/pdb

Classification: Hydrolase/DNA
Organism(s): Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-03-10
Deposition Author(s): Fye, J.M. , Harvey, S. , Hollis, T. , Perrino, F.W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

4ynq
Literature

Trex1-dsdna complex

Fye, J.M. , Harvey, S. , Hollis, T. , Perrino, F.W.

Primary Citation of Related Structures: 4YNQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Three-prime repair exonuclease 1 A 235 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSQTLPHGHMQTLIFLNLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPTDSHTAEGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGT
Three-prime repair exonuclease 1 B 235 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSQTLPHGHMQTLIFLNLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPTDSHTAEGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGT
Three-prime repair exonuclease 1 C 235 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSQTLPHGHMQTLIFLNLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPTDSHTAEGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGT
Three-prime repair exonuclease 1 D 235 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSQTLPHGHMQTLIFLNLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPTDSHTAEGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (24-MER) e 21 NA CGTGCTGACGTCAGCACGACG
DNA (24-MER) g 21 NA CGTGCTGACGTCAGCACGACG
DNA (5'-D(P*GP*TP*GP*CP*TP*GP*AP*CP*GP*TP*CP*AP*GP*CP*AP*CP*GP*AP*CP*G)-3') f 20 NA GTGCTGACGTCAGCACGACG
DNA (5'-D(P*GP*TP*GP*CP*TP*GP*AP*CP*GP*TP*CP*AP*GP*CP*AP*CP*GP*AP*CP*G)-3') h 20 NA GTGCTGACGTCAGCACGACG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-03-10
Deposition Author(s): Fye, J.M. , Harvey, S. , Hollis, T. , Perrino, F.W.