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4YD1

Ternary complex of human dna polymerase mu with 2-nt gapped dna substrate and an incoming nonhydrolyzable dumpnpp

PDB DOI: 10.2210/pdb4yd1/pdb

Classification: transferase/dna
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2015-02-20
Deposition Author(s): Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å

4yd1
Literature

Ternary complex of human dna polymerase mu with 2-nt gapped dna substrate and an incoming nonhydrolyzable dumpnpp

Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.

Primary Citation of Related Structures: 4YD1


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-directed DNA/RNA polymerase mu A 354 Homo Sapiens , Synthetic Construct GSAAASPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHSCCESPTRLAQQSHMDAFERSFCIFRLPQPGSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKGLWLNSHGLFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*GP*CP*AP*AP*TP*AP*CP*G)-3') t 10 NA CGGCAATACG
DNA (5'-D(*CP*GP*TP*A)-3') p 4 NA CGTA
DNA (5'-D(P*GP*CP*CP*G)-3') d 4 NA GCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-02-20
Deposition Author(s): Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.