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FASTA Sequence PDB Format mmCIF Format
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4XQK

Atp-dependent type isp restriction-modification enzyme llabiii bound to dna

PDB DOI: 10.2210/pdb4xqk/pdb

Classification: HYDROLASE/DNA
Organism(s): Escherichia Coli Str. K-12 Substr. Mds42 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-01-19
Deposition Author(s): Chand, M.K. , Saikrishnan, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

Literature

Atp-dependent type isp restriction-modification enzyme llabiii bound to dna

Chand, M.K. , Saikrishnan, K.

Primary Citation of Related Structures: 4XQK


Proteins
Molecule Chains Sequence Length Organism Sequence
LlaBIII A 1578 Escherichia Coli Str. K-12 Substr. Mds42 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVAFWKECKMTKQTFDDLINQINTVSNDVQRERGTLFEKLTLAYLKNEPTYKALYQNVWLLSEVPESYGIPKKDTGVDLVAEQKNGDLVAIQAKFYTNKVGKSEINSFVAELGKSYYQRGLIVSTMDDWNSNARETIDQNEKGIEIIGLSDLRNSQIDWSQFNFERPENVVVKKPKKLRDYQQTAKENALAHFKENDRGQLIMAPGTGKTFTSLKISEALSKDKDGPFKVLYLVPSIQLLTQTLRGWNNDTELTMTSMAVTSDRDASRGTDGTEDIKASDIGYPATTSSKKILQNWHDFESLPKQTDMLVVFSTYQSIEVIGEAQKEGFPEFDFIISDEAHRTTGAHEAAKEASAFSKVHSNNNVKGLKRMYQTATPKIYGESAKKNAKDKSILLSSMDDESKYGEVFFRMGFGQAVSRDILTDYKVMVLAVDEAAIQKDMQRTLADPENGLNIDDVGRIVGIWNGMMRRNGYKNPIKNSPYDGAPLERAIAFTRTIEESKKVSSQFEEVVNEYISEAIEDESIHLSMRHADGQMNALQKGEVLDWLANPNKPADEARIVSNVRFLTEGIDIPTLDAVIFLSPKKSQVDIVQAVGRIMRKAEGKDYGYIILPIVIPTGEKPETILDNNKNYETVWQVINALRSVDERFEAMIDKLNMAKPKQLKVIGVGSSPDQVNDQDKTTENTPVQTELEFEWDKFEGAIFGKIVQKVGDRKYLENWSKDVAKIAERQINWIKNKLSDKKDPISLEFKKFVSSLQHNINDSIDEKQAAEMLSQHLITKPIFEALFSEYSFVNQNPVSQAMESIVSELEKAGFAKEQENLEPLYESVRMRAEGIEKAEDKQKIIVTLYDKFFKTAFKATTERLGIVFTPIEVVDFIVHSVDDVLKKHFGKSLASKDVHILDPFTGTGTFIVRTLTYLKEQMDAGEISLADITRKFMKELHANEIVLLSYYIAAINIESTFDEINGDEEGYVPFEGIVLTDTFESTETEDTLDDDYFGTNDERLKRQQKVPITVIMGNPPYSAKQKNEDGNQIRTTYEKLDASLQNSWVETSTATNKNNLFDSYIRAMRWSSDRISDNGVIGFITNNSFIDGNAMDGMRQSLLEEFSDIYVLNLKGGIRGKTKDQSALEGGNIFDIMTGVTIIMLIKKSDYTVEGRIHYLDIGNNLDKYQKLEKLKNWKSLNGATSEFQNIIPNEKGDWINQRNSNFDELISLGNKKGSDSLFIDYTGGLKTGRDNWSWNFSKEQVELSMKSSIDYYNQYLGDTNIYKEDVPDISWTRSLKQRFERRETQSWQGERMYLGMYRPFTKKHVYYAQAWIDRQYQMTKVLPSSTSSNLMISLSNKTGGKQFSTLIVDVLPDVNLFTGGSQNLPKYLYRNNDTGNLFDNSEKYSAIRHEVLNKLPNLSEEDAMYYVYGLFHSIQYGKVYYEDLAKSFPKIPNVKHKEKYIKIGKELADLHLNYENQPICEGIDVQISELNYRVKKMKHPKKGVLDTIIYNESITIKNIPEKAYEYVVNGRPAIEWIINQYQVKTDKKSGITDDPNEFSDDPKYILNLLLSVITVSMRTLELIDELPEFEIQE
LlaBIII B 1578 Escherichia Coli Str. K-12 Substr. Mds42 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVAFWKECKMTKQTFDDLINQINTVSNDVQRERGTLFEKLTLAYLKNEPTYKALYQNVWLLSEVPESYGIPKKDTGVDLVAEQKNGDLVAIQAKFYTNKVGKSEINSFVAELGKSYYQRGLIVSTMDDWNSNARETIDQNEKGIEIIGLSDLRNSQIDWSQFNFERPENVVVKKPKKLRDYQQTAKENALAHFKENDRGQLIMAPGTGKTFTSLKISEALSKDKDGPFKVLYLVPSIQLLTQTLRGWNNDTELTMTSMAVTSDRDASRGTDGTEDIKASDIGYPATTSSKKILQNWHDFESLPKQTDMLVVFSTYQSIEVIGEAQKEGFPEFDFIISDEAHRTTGAHEAAKEASAFSKVHSNNNVKGLKRMYQTATPKIYGESAKKNAKDKSILLSSMDDESKYGEVFFRMGFGQAVSRDILTDYKVMVLAVDEAAIQKDMQRTLADPENGLNIDDVGRIVGIWNGMMRRNGYKNPIKNSPYDGAPLERAIAFTRTIEESKKVSSQFEEVVNEYISEAIEDESIHLSMRHADGQMNALQKGEVLDWLANPNKPADEARIVSNVRFLTEGIDIPTLDAVIFLSPKKSQVDIVQAVGRIMRKAEGKDYGYIILPIVIPTGEKPETILDNNKNYETVWQVINALRSVDERFEAMIDKLNMAKPKQLKVIGVGSSPDQVNDQDKTTENTPVQTELEFEWDKFEGAIFGKIVQKVGDRKYLENWSKDVAKIAERQINWIKNKLSDKKDPISLEFKKFVSSLQHNINDSIDEKQAAEMLSQHLITKPIFEALFSEYSFVNQNPVSQAMESIVSELEKAGFAKEQENLEPLYESVRMRAEGIEKAEDKQKIIVTLYDKFFKTAFKATTERLGIVFTPIEVVDFIVHSVDDVLKKHFGKSLASKDVHILDPFTGTGTFIVRTLTYLKEQMDAGEISLADITRKFMKELHANEIVLLSYYIAAINIESTFDEINGDEEGYVPFEGIVLTDTFESTETEDTLDDDYFGTNDERLKRQQKVPITVIMGNPPYSAKQKNEDGNQIRTTYEKLDASLQNSWVETSTATNKNNLFDSYIRAMRWSSDRISDNGVIGFITNNSFIDGNAMDGMRQSLLEEFSDIYVLNLKGGIRGKTKDQSALEGGNIFDIMTGVTIIMLIKKSDYTVEGRIHYLDIGNNLDKYQKLEKLKNWKSLNGATSEFQNIIPNEKGDWINQRNSNFDELISLGNKKGSDSLFIDYTGGLKTGRDNWSWNFSKEQVELSMKSSIDYYNQYLGDTNIYKEDVPDISWTRSLKQRFERRETQSWQGERMYLGMYRPFTKKHVYYAQAWIDRQYQMTKVLPSSTSSNLMISLSNKTGGKQFSTLIVDVLPDVNLFTGGSQNLPKYLYRNNDTGNLFDNSEKYSAIRHEVLNKLPNLSEEDAMYYVYGLFHSIQYGKVYYEDLAKSFPKIPNVKHKEKYIKIGKELADLHLNYENQPICEGIDVQISELNYRVKKMKHPKKGVLDTIIYNESITIKNIPEKAYEYVVNGRPAIEWIINQYQVKTDKKSGITDDPNEFSDDPKYILNLLLSVITVSMRTLELIDELPEFEIQE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) c 28 NA CACCTCGGCTCAGTCTATTAGCTAGAGC
DNA (28-MER) e 28 NA CACCTCGGCTCAGTCTATTAGCTAGAGC
DNA (28-MER) d 28 NA GCTCTAGCTAATAGACTGAGCCGAGGTG
DNA (28-MER) f 28 NA GCTCTAGCTAATAGACTGAGCCGAGGTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-01-19
Deposition Author(s): Chand, M.K. , Saikrishnan, K.