PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4XMK

Crystal structure of fab of hiv-1 gp120 v3-specific human monoclonal antibody 2424 in complex with jr-fl v3 peptide

PDB DOI: 10.2210/pdb4xmk/pdb

Classification: immune system/viral protein
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2015-01-14
Deposition Author(s): Kong, X.-P. , Pan, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.179 Å

4xmk
Literature

Crystal structure of fab of hiv-1 gp120 v3-specific human monoclonal antibody 2424 in complex with jr-fl v3 peptide

Kong, X.-P. , Pan, R.

Primary Citation of Related Structures: 4XMK


Proteins
Molecule Chains Sequence Length Organism Sequence
Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 L 215 Homo Sapiens , Synthetic Construct DIVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 M 215 Homo Sapiens , Synthetic Construct DIVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 N 215 Homo Sapiens , Synthetic Construct DIVMNQSPPSLAVTPGEPASISCRASQSLLYSDGHNYLDWYLQKPGQAPQLLIYLGSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQPLQSYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 H 223 Homo Sapiens , Synthetic Construct EVQLVGSGGGLIQPGGSLRLSCAASDFSVSEYYMTWVRQAPGKGLEWVAVLYKDGSQFYAPSVKGRFIVSRDNSKNSLYLQMNNLRGEDTAVYFCARENADYGSDYYFGMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSSVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEP
Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 I 223 Homo Sapiens , Synthetic Construct EVQLVGSGGGLIQPGGSLRLSCAASDFSVSEYYMTWVRQAPGKGLEWVAVLYKDGSQFYAPSVKGRFIVSRDNSKNSLYLQMNNLRGEDTAVYFCARENADYGSDYYFGMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSSVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEP
Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424 J 223 Homo Sapiens , Synthetic Construct EVQLVGSGGGLIQPGGSLRLSCAASDFSVSEYYMTWVRQAPGKGLEWVAVLYKDGSQFYAPSVKGRFIVSRDNSKNSLYLQMNNLRGEDTAVYFCARENADYGSDYYFGMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSSVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEP
HIV-1 JR-FL gp120 V3 peptide P 11 Homo Sapiens , Synthetic Construct IHIGPGRAFYT
HIV-1 JR-FL gp120 V3 peptide Q 11 Homo Sapiens , Synthetic Construct IHIGPGRAFYT
HIV-1 JR-FL gp120 V3 peptide R 11 Homo Sapiens , Synthetic Construct IHIGPGRAFYT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-01-14
Deposition Author(s): Kong, X.-P. , Pan, R.