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4X5V

Crystal structure of the post-catalytic nick complex of dna polymerase lambda with a templating a and incorporated 8-oxo-dgmp

PDB DOI: 10.2210/pdb4x5v/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2014-12-05
Deposition Author(s): Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.15 Å

Literature

Crystal structure of the post-catalytic nick complex of dna polymerase lambda with a templating a and incorporated 8-oxo-dgmp

Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.

Primary Citation of Related Structures: 4X5V


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 325 Homo Sapiens , Synthetic Construct NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*CP*CP*G)-3') d 4 NA GCCG
DNA (5'-D(*CP*AP*GP*TP*AP*CP*(8OG))-3') p 7 NA CAGTACG
DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3') t 11 NA CGGCAGTACTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-12-05
Deposition Author(s): Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.