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4WYM

Structural basis of hiv-1 capsid recognition by cpsf6

PDB DOI: 10.2210/pdb4wym/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B

Deposited: 2014-11-17
Deposition Author(s): Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

4wym
Literature

Structural basis of hiv-1 capsid recognition by cpsf6

Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.

Primary Citation of Related Structures: 4WYM


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein p24 A 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 B 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 C 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 D 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 E 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 F 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 G 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 H 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 I 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 J 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 K 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
Capsid protein p24 L 231 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 M 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 N 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 O 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 P 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 Q 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 R 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 S 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 T 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 U 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 V 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 W 17 Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B GTPVLFPGQPFGQPPLG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-11-17
Deposition Author(s): Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.