Structural basis of hiv-1 capsid recognition by cpsf6
PDB DOI: 10.2210/pdb4wym/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B
Deposited: 2014-11-17 Deposition Author(s): Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.
Structural basis of hiv-1 capsid recognition by cpsf6
Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.
Primary Citation of Related Structures: 4WYM
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein p24 | A | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | B | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | C | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | D | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | E | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | F | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | G | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | H | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | I | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | J | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | K | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
Capsid protein p24 | L | 231 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | M | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | N | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | O | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | P | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | Q | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | R | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | S | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | T | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | U | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | V | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 | W | 17 | Homo Sapiens , Human Immunodeficiency Virus Type 1 Group M Subtype B | GTPVLFPGQPFGQPPLG |
Method: X-RAY DIFFRACTION
Deposited Date: 2014-11-17 Deposition Author(s): Battacharya, A. , Hart, P.J. , Ivanov, D.N. , Taylor, A.B.