Structure of the hepatitis c virus envelope glycoprotein e2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, p1 crystal form
PDB DOI: 10.2210/pdb4wht/pdb
Classification: VIRAL PROTEIN Organism(s): Hepatitis C Virus , Rattus Norvegicus
Deposited: 2014-09-23 Deposition Author(s): Krey, T. , Rey, F.A.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Epitope peptide | A | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | C | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | E | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | G | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | I | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | K | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | M | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | O | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | Q | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | S | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | U | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Epitope peptide | X | 12 | Hepatitis C Virus , Rattus Norvegicus | QLINTNGSWHVN |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | J | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | B | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | D | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | F | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | H | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | L | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | N | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | P | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | R | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | T | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | V | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Light chain of the Fab fragment derived from neutralizing antibody 3/11 | Y | 220 | Hepatitis C Virus , Rattus Norvegicus | RSDIVLTQTTPTLSATIGQSVSISCRSSQSLLESDGNTYLNWLLQRPGQSPQLLIYSVSNLESGVPNRFSGSGSETDFTLKISGVEAEDLGVYYCMQTTHAPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC |
Method: X-RAY DIFFRACTION