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FASTA Sequence PDB Format mmCIF Format
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4W9M

Amppnp bound rad50 in complex with dsdna

PDB DOI: 10.2210/pdb4w9m/pdb

Classification: HYDROLASE
Organism(s): Thermotoga Maritima Msb8 , Synthetic Construct

Deposited: 2014-08-27
Deposition Author(s): Lammens, K. , Rojowska, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

4w9m
Literature

Amppnp bound rad50 in complex with dsdna

Lammens, K. , Rojowska, A.

Primary Citation of Related Structures: 4W9M


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*GP*AP*CP*CP*GP*AP*CP*C)-3') y 15 NA GGTCGGTGACCGACC
DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*GP*AP*CP*CP*GP*AP*CP*C)-3') z 15 NA GGTCGGTGACCGACC
DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*CP*AP*CP*CP*GP*AP*CP*C)-3') a 15 NA GGTCGGTCACCGACC
DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*CP*AP*CP*CP*GP*AP*CP*C)-3') g 15 NA GGTCGGTCACCGACC

Proteins
Molecule Chains Sequence Length Organism Sequence
Probable DNA double-strand break repair Rad50 ATPase,Probable DNA double-strand break repair Rad50 ATPase C 365 Thermotoga Maritima Msb8 , Synthetic Construct MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDYVNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEKMKKLENEISSGGAGGAGGSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDRKLRITGGVVVNE
Probable DNA double-strand break repair Rad50 ATPase,Probable DNA double-strand break repair Rad50 ATPase E 365 Thermotoga Maritima Msb8 , Synthetic Construct MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDYVNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEKMKKLENEISSGGAGGAGGSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDRKLRITGGVVVNE
Probable DNA double-strand break repair Rad50 ATPase,Probable DNA double-strand break repair Rad50 ATPase I 365 Thermotoga Maritima Msb8 , Synthetic Construct MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDYVNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEKMKKLENEISSGGAGGAGGSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDRKLRITGGVVVNE
Probable DNA double-strand break repair Rad50 ATPase,Probable DNA double-strand break repair Rad50 ATPase K 365 Thermotoga Maritima Msb8 , Synthetic Construct MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDYVNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEKMKKLENEISSGGAGGAGGSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDRKLRITGGVVVNE
Exonuclease, putative D 37 Thermotoga Maritima Msb8 , Synthetic Construct DKLDYFELFKEYLKKREENHEKLLKILDELLDEVKKS
Exonuclease, putative F 37 Thermotoga Maritima Msb8 , Synthetic Construct DKLDYFELFKEYLKKREENHEKLLKILDELLDEVKKS
Exonuclease, putative J 37 Thermotoga Maritima Msb8 , Synthetic Construct DKLDYFELFKEYLKKREENHEKLLKILDELLDEVKKS
Exonuclease, putative L 37 Thermotoga Maritima Msb8 , Synthetic Construct DKLDYFELFKEYLKKREENHEKLLKILDELLDEVKKS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-08-27
Deposition Author(s): Lammens, K. , Rojowska, A.