4V8K
Crystal structure of the lh1-rc complex from thermochromatium tepidum in p21 form
PDB DOI: 10.2210/pdb4v8k/pdb
Classification: PHOTOSYNTHESIS Organism(s): Thermochromatium Tepidum
Deposited: 2013-11-22 Deposition Author(s): Miki, K. , Niwa, S. , Takeda, K. , Wang-Otomo, Z.-Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.006 Å
Crystal structure of the lh1-rc complex from thermochromatium tepidum in p21 form
Miki, K. , Niwa, S. , Takeda, K. , Wang-Otomo, Z.-Y.
Primary Citation of Related Structures: 4V8K
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosynthetic reaction center cytochrome c subunit | AC | 404 | Thermochromatium Tepidum | MSPAQQLTLPAVIVVASVMLLGCEGPPPGTEQIGYRGVGMENYYNKRQRALSIQANQPVESLPAADSTGPKASEVYQNVQVLKDLSVGEFTRTMVAVTTWVSPKEGCNYCHVPGNWASDDIYTKVVSRRMFELVRAANSDWKAHVAETGVTCYTCHRGNPVPKYAWVTDPGPKYPSGLKPTGQNYGSKTVAYASLPFDPLTPFLDQANEIRITGNAALAGSNPASLKQAEWTFGLMMNISDSLGVGCTFCHNTRAFNDWTQSTPKRTTAWYAIRHVRDINQNYIWPLNDVLPASRKGPYGDPLRVSCMTCHQAVNKPLYGAQMAKDYPGLYKTAVTQEALAGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVEPAPVEEVAPAPAAQRL |
| Photosynthetic reaction center cytochrome c subunit | BC | 404 | Thermochromatium Tepidum | MSPAQQLTLPAVIVVASVMLLGCEGPPPGTEQIGYRGVGMENYYNKRQRALSIQANQPVESLPAADSTGPKASEVYQNVQVLKDLSVGEFTRTMVAVTTWVSPKEGCNYCHVPGNWASDDIYTKVVSRRMFELVRAANSDWKAHVAETGVTCYTCHRGNPVPKYAWVTDPGPKYPSGLKPTGQNYGSKTVAYASLPFDPLTPFLDQANEIRITGNAALAGSNPASLKQAEWTFGLMMNISDSLGVGCTFCHNTRAFNDWTQSTPKRTTAWYAIRHVRDINQNYIWPLNDVLPASRKGPYGDPLRVSCMTCHQAVNKPLYGAQMAKDYPGLYKTAVTQEALAGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVEPAPVEEVAPAPAAQRL |
| Photosynthetic reaction center L subunit | AL | 281 | Thermochromatium Tepidum | MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVVGFCFTLLGVLLIVWGATIGPTGPTSDLQTYNLWRISIAPPDLSYGLRMAPLTEGGLWQIITICAAGAFISWALREVEICRKLGIGFHVPFAFSFAIGAYLVLVFVRPLLMGAWGHGFPYGILSHLDWVSNVGYQFLHFHYNPAHMLAISFFFTNCLALSMHGSLILSVTNPQKGEPVKTSEHENTFFRDIVGYSIGALAIHRLGLFLALSAAFWSAVCILISGPFWTRGWPEWWNWWLELPLW |
| Photosynthetic reaction center L subunit | BL | 281 | Thermochromatium Tepidum | MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVVGFCFTLLGVLLIVWGATIGPTGPTSDLQTYNLWRISIAPPDLSYGLRMAPLTEGGLWQIITICAAGAFISWALREVEICRKLGIGFHVPFAFSFAIGAYLVLVFVRPLLMGAWGHGFPYGILSHLDWVSNVGYQFLHFHYNPAHMLAISFFFTNCLALSMHGSLILSVTNPQKGEPVKTSEHENTFFRDIVGYSIGALAIHRLGLFLALSAAFWSAVCILISGPFWTRGWPEWWNWWLELPLW |
| Photosynthetic reaction center M subunit | AM | 325 | Thermochromatium Tepidum | MPEYQNIFTAVQVRAPAYPGVPLPKGNLPRIGRPIFSYWLGKIGDAQIGPIYLGLTGTLSIFFGLVAISIIGFNMLASVHWDVFQFLKHFFWLGLEPPPPQYGLRIPPLSEGGWWLMAGLFLTLSILLWWVRTYKRAEALGMSQHLSWAFAAAIFFYLVLGFIRPVMMGSWAKAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILSVSRFGGDREIDQITHRGTAAERAALFWRWTMGFNVTMESIHRWAWWCAVLTVITAGIGILLSGTVVDNWYLWAVKHGMAPAYPEVVTAVNPYETAAEVMQ |
| Photosynthetic reaction center M subunit | BM | 325 | Thermochromatium Tepidum | MPEYQNIFTAVQVRAPAYPGVPLPKGNLPRIGRPIFSYWLGKIGDAQIGPIYLGLTGTLSIFFGLVAISIIGFNMLASVHWDVFQFLKHFFWLGLEPPPPQYGLRIPPLSEGGWWLMAGLFLTLSILLWWVRTYKRAEALGMSQHLSWAFAAAIFFYLVLGFIRPVMMGSWAKAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILSVSRFGGDREIDQITHRGTAAERAALFWRWTMGFNVTMESIHRWAWWCAVLTVITAGIGILLSGTVVDNWYLWAVKHGMAPAYPEVVTAVNPYETAAEVMQ |
| Photosynthetic reaction center H subunit | AH | 259 | Thermochromatium Tepidum | MSAGITHYIDAAQITIWAFWLFFFGLIIYLRREDKREGYPLDSDRTERSGGRVKVVGFPDLPDPKTFVLPHNGGTVVAPRVEAPVAVNATPFSPAPGSPLVPNGDPMLSGFGPAASPDRPKHCDLTFEGLPKIVPMRVAKEFSIAEGDPDPRGMTVVGLDGEVAGTVSDVWVDRSEPQIRYLEVEVAANKKKVLLPIGFSRFDKKARKVKVDAIKAAHFANVPTLSNPDQVTLYEEDKVCAYYAGGKLYATAERAGPLL |
| Photosynthetic reaction center H subunit | BH | 259 | Thermochromatium Tepidum | MSAGITHYIDAAQITIWAFWLFFFGLIIYLRREDKREGYPLDSDRTERSGGRVKVVGFPDLPDPKTFVLPHNGGTVVAPRVEAPVAVNATPFSPAPGSPLVPNGDPMLSGFGPAASPDRPKHCDLTFEGLPKIVPMRVAKEFSIAEGDPDPRGMTVVGLDGEVAGTVSDVWVDRSEPQIRYLEVEVAANKKKVLLPIGFSRFDKKARKVKVDAIKAAHFANVPTLSNPDQVTLYEEDKVCAYYAGGKLYATAERAGPLL |
| LH1 alpha polypeptide | AA | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AD | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AF | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AI | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AK | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AO | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AQ | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AS | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AU | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AW | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | AY | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | A1 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | A3 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | A5 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | A7 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | A9 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BA | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BD | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BF | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BI | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BK | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BO | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BQ | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BS | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BU | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BW | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | BY | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | B1 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | B3 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | B5 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | B7 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 alpha polypeptide | B9 | 61 | Thermochromatium Tepidum | MFTMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALGKK |
| LH1 beta polypeptide | AB | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AE | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AG | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AJ | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AN | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AP | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AR | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AT | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AV | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AX | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | AZ | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | A2 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | A4 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | A6 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | A8 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | A0 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BB | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BE | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BG | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BJ | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BN | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BP | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BR | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BT | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BV | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BX | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | BZ | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | B2 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | B4 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | B6 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | B8 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
| LH1 beta polypeptide | B0 | 47 | Thermochromatium Tepidum | MAEQKSLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2013-11-22 Deposition Author(s): Miki, K. , Niwa, S. , Takeda, K. , Wang-Otomo, Z.-Y.