4UNC
The crystal structure of i-dmoi in complex with its target dna at 8 days incubation in 5mm mn (state 6)
PDB DOI: 10.2210/pdb4unc/pdb
Classification: HYDROLASE/DNA Organism(s): Desulfurococcus Mobilis , Synthetic Construct
Deposited: 2014-05-26 Deposition Author(s): Gomez, H. , Marcaida, M.J. , Molina, R. , Montoya, G. , Orozco, M. , Prieto, J. , Redondo, P. , Stella, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
The crystal structure of i-dmoi in complex with its target dna at 8 days incubation in 5mm mn (state 6)
Gomez, H. , Marcaida, M.J. , Molina, R. , Montoya, G. , Orozco, M. , Prieto, J. , Redondo, P. , Stella, S.
Primary Citation of Related Structures: 4UNC
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HOMING ENDONUCLEASE I-DMOI | A | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | D | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | G | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*A)-3' | b | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*A)-3' | e | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*A)-3' | h | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3' | c | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3' | f | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3' | i | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*G)-3' | j | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*G)-3' | l | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*G)-3' | n | 11 | NA | GTTCCGGCGCG |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3' | k | 10 | NA | CCGGCAAGGC |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3' | m | 10 | NA | CCGGCAAGGC |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3' | o | 10 | NA | CCGGCAAGGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-05-26 Deposition Author(s): Gomez, H. , Marcaida, M.J. , Molina, R. , Montoya, G. , Orozco, M. , Prieto, J. , Redondo, P. , Stella, S.