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4TQS

Ternary complex of y-family dna polymerase dpo4 with (5's)-8,5'-cyclo-2'-deoxyguanosine and dctp

PDB DOI: 10.2210/pdb4tqs/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2014-06-11
Deposition Author(s): Zhao, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.06 Å

4tqs
Literature

Ternary complex of y-family dna polymerase dpo4 with (5's)-8,5'-cyclo-2'-deoxyguanosine and dctp

Zhao, L.

Primary Citation of Related Structures: 4TQS


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
DNA polymerase IV B 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3') c 12 NA GGGGGAAGGATT
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3') p 12 NA GGGGGAAGGATT
DNA (5'-D(P*TP*CP*AP*CP*(2LF)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') d 18 NA TCACXGAATCCTTCCCCC
DNA (5'-D(P*TP*CP*AP*CP*(2LF)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') t 18 NA TCACXGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-06-11
Deposition Author(s): Zhao, L.