4S1R
Crystal structure of a vrc01-lineage antibody, 45-vrc01.h08.f-117225, in complex with clade a/e hiv-1 gp120 core
PDB DOI: 10.2210/pdb4s1r/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2015-01-14 Deposition Author(s): Kwon, Y.D. , Kwong, P.D. , Yang, Y. , Zhang, B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.214 Å
Crystal structure of a vrc01-lineage antibody, 45-vrc01.h08.f-117225, in complex with clade a/e hiv-1 gp120 core
Kwon, Y.D. , Kwong, P.D. , Yang, Y. , Zhang, B.
Primary Citation of Related Structures: 4S1R
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| clade A/E 93TH057 HIV-1 gp120 core | G | 353 | Homo Sapiens , Human Immunodeficiency Virus 1 | VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIE |
| Fab of VRC01-lineage antibody,45-VRC01.H08.F-117225 heavy chain | H | 235 | Homo Sapiens , Human Immunodeficiency Virus 1 | QVRLVQSGPQIKTPGASVTISCGTSGYDFMESLINWVRQDIGKGPEWMGWINPRGGGVNYGRRFQGKVTMTRDVSSGTAYLTLRGLTSDDTAKYYCVRGKSCCGGRRYCNGADCFNWDFEHWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
| Fab of VRC01 light chain | L | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYTLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-01-14 Deposition Author(s): Kwon, Y.D. , Kwong, P.D. , Yang, Y. , Zhang, B.