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4RQS

Crystal structure of fully glycosylated hiv-1 gp120 core bound to cd4 and 17b fab

PDB DOI: 10.2210/pdb4rqs/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus Type 1 (Isolate Yu2)

Deposited: 2014-11-05
Deposition Author(s): Kong, L. , Kwong, P.D. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.493 Å

4rqs
Literature

Crystal structure of fully glycosylated hiv-1 gp120 core bound to cd4 and 17b fab

Kong, L. , Kwong, P.D. , Wilson, I.A.

Primary Citation of Related Structures: 4RQS


Proteins
Molecule Chains Sequence Length Organism Sequence
2-domain CD4 B 185 Homo Sapiens , Human Immunodeficiency Virus Type 1 (Isolate Yu2) KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASNT
17b Fab Light Chain C 214 Homo Sapiens , Human Immunodeficiency Virus Type 1 (Isolate Yu2) DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
17b Fab Heavy Chain D 229 Homo Sapiens , Human Immunodeficiency Virus Type 1 (Isolate Yu2) EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
HIV-1 YU2 gp120 core chimeric protein G 313 Homo Sapiens , Human Immunodeficiency Virus Type 1 (Isolate Yu2) GARSEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-11-05
Deposition Author(s): Kong, L. , Kwong, P.D. , Wilson, I.A.