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4RPZ

Human dna polymerase beta with gapped dna containing an 8-oxo-7,8-dihydro-guanine (8-oxog)and dctp soaked with mgcl2 for 60 s

PDB DOI: 10.2210/pdb4rpz/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2014-10-31
Deposition Author(s): Reed, A.J. , Suo, Z. , Vyas, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.19 Å

4rpz
Literature

Human dna polymerase beta with gapped dna containing an 8-oxo-7,8-dihydro-guanine (8-oxog)and dctp soaked with mgcl2 for 60 s

Reed, A.J. , Suo, Z. , Vyas, R.

Primary Citation of Related Structures: 4RPZ


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 343 Homo Sapiens , Synthetic Construct MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3') p 11 NA GCTGATGCGCC
DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 16 NA CCGACGGCGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-10-31
Deposition Author(s): Reed, A.J. , Suo, Z. , Vyas, R.