Crystal structure of the anti-hiv-1 antibody 2.2c in complex with hiv-1 93ug037 gp120
PDB DOI: 10.2210/pdb4r4n/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct
Deposited: 2014-08-19 Deposition Author(s): Acharya, P. , Kwong, P.D. , Louder, R.
Crystal structure of the anti-hiv-1 antibody 2.2c in complex with hiv-1 93ug037 gp120
Acharya, P. , Kwong, P.D. , Louder, R.
Primary Citation of Related Structures: 4R4N
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
M48U1 peptide | A | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | B | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | I | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | E | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | M | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | P | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | S | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
M48U1 peptide | V | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
Antibody 2.2c LIGHT CHAIN | L | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | D | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | G | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | K | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | O | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | R | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | U | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c LIGHT CHAIN | X | 210 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | DIQMTQSPSFVSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLVIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHLIGLRSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
Antibody 2.2c heavy CHAIN | H | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | C | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | F | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | J | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | N | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | Q | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | T | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Antibody 2.2c heavy CHAIN | W | 220 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLQQWGAGLLKPSETLSLTCGVYGESLSGHYWSWVRQPPGKRLEWIGEIKHNGSPNYHPSLKSRVTISLDMSKNQFSLNLTSVTAADTAVYFCARRSNWPYLPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Method: X-RAY DIFFRACTION
Deposited Date: 2014-08-19 Deposition Author(s): Acharya, P. , Kwong, P.D. , Louder, R.