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4R2X

Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine

PDB DOI: 10.2210/pdb4r2x/pdb

Classification: TRANSFERASE
Organism(s): Shewanella Oneidensis

Deposited: 2014-08-13
Deposition Author(s): Manuvera, V.A. , Mordkovich, N.N. , Polyakov, K.M. , Popov, V.O. , Safonova, T.N. , Veiko, V.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 0.93 Å

4r2x
Literature

Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine

Manuvera, V.A. , Mordkovich, N.N. , Polyakov, K.M. , Popov, V.O. , Safonova, T.N. , Veiko, V.P.

Primary Citation of Related Structures: 4R2X


Proteins
Molecule Chains Sequence Length Organism Sequence
uridine phosphorylase C 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
uridine phosphorylase D 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
uridine phosphorylase E 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
uridine phosphorylase F 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
uridine phosphorylase A 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
uridine phosphorylase B 252 Shewanella Oneidensis MADVFHLGLTKAMLDGATLAIVPGDPERVKRIAELMDNATFLASHREYTSYLAYADGKPVVICSTGIGGPSTSIAVEELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTAMVAACRDAGVEPHIGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYEMESATLFTMCATQGWRAACVAGVIVNRTQQEIPDEATMKKTEVSAVSIVVAAAKKLLA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-08-13
Deposition Author(s): Manuvera, V.A. , Mordkovich, N.N. , Polyakov, K.M. , Popov, V.O. , Safonova, T.N. , Veiko, V.P.