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4QWC

Ternary crystal structures of a y-family dna polymerase dpo4 from sulfobus solfataricus in comples with dna and l-dcdp

PDB DOI: 10.2210/pdb4qwc/pdb

Classification: TRANSFERASE/DNA
Organism(s): Saccharolobus Solfataricus P2 , Synthetic Construct

Deposited: 2014-07-16
Deposition Author(s): Suo, Z. , Vyas, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

4qwc
Literature

Ternary crystal structures of a y-family dna polymerase dpo4 from sulfobus solfataricus in comples with dna and l-dcdp

Suo, Z. , Vyas, R.

Primary Citation of Related Structures: 4QWC


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 343 Saccharolobus Solfataricus P2 , Synthetic Construct MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEA
DNA polymerase IV D 343 Saccharolobus Solfataricus P2 , Synthetic Construct MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3') b 13 NA GGCTACAGGACTC
DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3') e 13 NA GGCTACAGGACTC
DNA (5'-D(*TP*TP*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3') c 18 NA TTCAGGAGTCCTGTAGCC
DNA (5'-D(*TP*TP*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3') f 18 NA TTCAGGAGTCCTGTAGCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-07-16
Deposition Author(s): Suo, Z. , Vyas, R.