4QF1
Crystal structure of unliganded ch59ua, the inferred unmutated ancestor of the rv144 anti-hiv antibody lineage producing ch59
PDB DOI: 10.2210/pdb4qf1/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens
Deposited: 2014-05-19 Deposition Author(s): Alam, S.M. , Bonsignori, M. , Bradley, T. , Dennison, S.M. , Easterhoff, D. , Haynes, B.F. , Jaeger, F.H. , Kaewkungwal, J. , Kelsoe, G. , Kepler, T.B. , Kim, J. , Liao, H.-X. , Lloyd, K.E. , Luo, K. , Michael, N. , Montefiori, D.C. , Moody, M.A. , Morris, L. , Nicely, N.I. , Nitayaphan, S. , Parks, R. , Pitisuttithum, P. , Rerks-Ngarm, S. , Santra, S. , Scearce, R.M. , Stolarchuk, C. , Sutherland, L.L. , Tomaras, G. , Wiehe, K. , Zhang, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.4 Å
Crystal structure of unliganded ch59ua, the inferred unmutated ancestor of the rv144 anti-hiv antibody lineage producing ch59
Alam, S.M. , Bonsignori, M. , Bradley, T. , Dennison, S.M. , Easterhoff, D. , Haynes, B.F. , Jaeger, F.H. , Kaewkungwal, J. , Kelsoe, G. , Kepler, T.B. , Kim, J. , Liao, H.-X. , Lloyd, K.E. , Luo, K. , Michael, N. , Montefiori, D.C. , Moody, M.A. , Morris, L. , Nicely, N.I. , Nitayaphan, S. , Parks, R. , Pitisuttithum, P. , Rerks-Ngarm, S. , Santra, S. , Scearce, R.M. , Stolarchuk, C. , Sutherland, L.L. , Tomaras, G. , Wiehe, K. , Zhang, R.
Primary Citation of Related Structures: 4QF1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CH59UA Fab fragment of heavy chain | H | 225 | Homo Sapiens | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDSPRGELPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| CH59UA Fab fragment of heavy chain | A | 225 | Homo Sapiens | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDSPRGELPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| Inferred unmutated ancestor (UA) of anti-HIV antibody CH59 | L | 214 | Homo Sapiens | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
| Inferred unmutated ancestor (UA) of anti-HIV antibody CH59 | B | 214 | Homo Sapiens | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-05-19 Deposition Author(s): Alam, S.M. , Bonsignori, M. , Bradley, T. , Dennison, S.M. , Easterhoff, D. , Haynes, B.F. , Jaeger, F.H. , Kaewkungwal, J. , Kelsoe, G. , Kepler, T.B. , Kim, J. , Liao, H.-X. , Lloyd, K.E. , Luo, K. , Michael, N. , Montefiori, D.C. , Moody, M.A. , Morris, L. , Nicely, N.I. , Nitayaphan, S. , Parks, R. , Pitisuttithum, P. , Rerks-Ngarm, S. , Santra, S. , Scearce, R.M. , Stolarchuk, C. , Sutherland, L.L. , Tomaras, G. , Wiehe, K. , Zhang, R.