PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4QCB

Protein-dna complex of vaccinia virus d4 with double-stranded non-specific dna

PDB DOI: 10.2210/pdb4qcb/pdb

Classification: HYDROLASE/DNA
Organism(s): Vaccinia Virus , Synthetic Construct

Deposited: 2014-05-09
Deposition Author(s): Banerjee, S. , Chattopadhyay, D. , Ricciardi, R. , Schormann, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.89 Å

4qcb
Literature

Protein-dna complex of vaccinia virus d4 with double-stranded non-specific dna

Banerjee, S. , Chattopadhyay, D. , Ricciardi, R. , Schormann, N.

Primary Citation of Related Structures: 4QCB


Proteins
Molecule Chains Sequence Length Organism Sequence
Uracil-DNA glycosylase A 221 Vaccinia Virus , Synthetic Construct GSHMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY
Uracil-DNA glycosylase B 221 Vaccinia Virus , Synthetic Construct GSHMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*C)-3' c 12 NA GCAAACGTTTGC
5'-D(*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*C)-3' d 12 NA GCAAACGTTTGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-05-09
Deposition Author(s): Banerjee, S. , Chattopadhyay, D. , Ricciardi, R. , Schormann, N.