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4OFE

Structural basis for thymine glycosylase activity on t:o6-methylg mismatch by methyl-cpg binding domain protein 4: implications for roles of arg468 in mismatch recognition and catalysis

PDB DOI: 10.2210/pdb4ofe/pdb

Classification: HYDROLASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2014-01-14
Deposition Author(s): Lee, S. , Lin, Y.-L. , Ouzon-Shubeita, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.15 Å

4ofe
Literature

Structural basis for thymine glycosylase activity on t:o6-methylg mismatch by methyl-cpg binding domain protein 4: implications for roles of arg468 in mismatch recognition and catalysis

Lee, S. , Lin, Y.-L. , Ouzon-Shubeita, H.

Primary Citation of Related Structures: 4OFE


Proteins
Molecule Chains Sequence Length Organism Sequence
Methyl-CpG-binding domain protein 4 A 192 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFMALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQVHPENHKLNKYHDWLWENHEKLSLS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
12-mer DNA(T) c 12 NA CCAGCGTGCAGC
12-mer DNA(G) d 12 NA GCTGCGCGCTGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-01-14
Deposition Author(s): Lee, S. , Lin, Y.-L. , Ouzon-Shubeita, H.