4NQA
Crystal structure of liganded hrxr-alpha/hlxr-beta heterodimer on dna
PDB DOI: 10.2210/pdb4nqa/pdb
Classification: TRANSCRIPTION REGULATOR/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2013-11-24 Deposition Author(s): Benod, C. , Gustafsson, J.A. , Lou, X.H. , Phillips, K.J. , Suh, J.H. , Toresson, G. , Webb, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.102 Å
Crystal structure of liganded hrxr-alpha/hlxr-beta heterodimer on dna
Benod, C. , Gustafsson, J.A. , Lou, X.H. , Phillips, K.J. , Suh, J.H. , Toresson, G. , Webb, P.
Primary Citation of Related Structures: 4NQA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Retinoic acid receptor RXR-alpha | A | 365 | Homo Sapiens , Synthetic Construct | MNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT |
| Retinoic acid receptor RXR-alpha | H | 365 | Homo Sapiens , Synthetic Construct | MNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT |
| Liver X nuclear receptor beta | B | 391 | Homo Sapiens , Synthetic Construct | MKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE |
| Liver X nuclear receptor beta | I | 391 | Homo Sapiens , Synthetic Construct | MKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE |
| Nuclear receptor coactivator 2 | C | 13 | Homo Sapiens , Synthetic Construct | KHKILHRLLQDSS |
| Nuclear receptor coactivator 2 | D | 13 | Homo Sapiens , Synthetic Construct | KHKILHRLLQDSS |
| Nuclear receptor coactivator 2 | J | 13 | Homo Sapiens , Synthetic Construct | KHKILHRLLQDSS |
| Nuclear receptor coactivator 2 | K | 13 | Homo Sapiens , Synthetic Construct | KHKILHRLLQDSS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*TP*AP*AP*GP*GP*TP*CP*AP*CP*TP*TP*CP*AP*GP*GP*TP*CP*A)-3' | e | 18 | NA | TAAGGTCACTTCAGGTCA |
| 5'-D(*TP*AP*AP*GP*GP*TP*CP*AP*CP*TP*TP*CP*AP*GP*GP*TP*CP*A)-3' | l | 18 | NA | TAAGGTCACTTCAGGTCA |
| 5'-D(*TP*AP*TP*GP*AP*CP*CP*TP*GP*AP*AP*GP*TP*GP*AP*CP*CP*T)-3' | f | 18 | NA | TATGACCTGAAGTGACCT |
| 5'-D(*TP*AP*TP*GP*AP*CP*CP*TP*GP*AP*AP*GP*TP*GP*AP*CP*CP*T)-3' | m | 18 | NA | TATGACCTGAAGTGACCT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2013-11-24 Deposition Author(s): Benod, C. , Gustafsson, J.A. , Lou, X.H. , Phillips, K.J. , Suh, J.H. , Toresson, G. , Webb, P.