4NOD
Distinct structural features of tfam drive mitochondrial dna packaging versus transcriptional activation
PDB DOI: 10.2210/pdb4nod/pdb
Classification: TRANSCRIPTION REGULATOR/DNA Organism(s): Homo Sapiens
Deposited: 2013-11-19 Deposition Author(s): Chan, D.C. , Lovely, G.A. , Ngo, H.B. , Phillips, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.897 Å
Distinct structural features of tfam drive mitochondrial dna packaging versus transcriptional activation
Chan, D.C. , Lovely, G.A. , Ngo, H.B. , Phillips, R.
Primary Citation of Related Structures: 4NOD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transcription factor A, mitochondrial | A | 230 | Homo Sapiens | MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMSSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK |
| Transcription factor A, mitochondrial | B | 230 | Homo Sapiens | MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMSSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK |
| Transcription factor A, mitochondrial | G | 230 | Homo Sapiens | MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMSSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK |
| Transcription factor A, mitochondrial | H | 230 | Homo Sapiens | MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMSSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*TP*TP*GP*GP*GP*GP*TP*AP*TP*GP*GP*GP*GP*CP*TP*TP*GP*GP*(BRU)P*TP*GP*G)-3' | c | 22 | NA | TTGGGGTATGGGGCTTGGUTGG |
| 5'-D(*TP*TP*GP*GP*GP*GP*TP*AP*TP*GP*GP*GP*GP*CP*TP*TP*GP*GP*(BRU)P*TP*GP*G)-3' | e | 22 | NA | TTGGGGTATGGGGCTTGGUTGG |
| 5'-D(*TP*TP*GP*GP*GP*GP*TP*AP*TP*GP*GP*GP*GP*CP*TP*TP*GP*GP*(BRU)P*TP*GP*G)-3' | i | 22 | NA | TTGGGGTATGGGGCTTGGUTGG |
| 5'-D(*TP*TP*GP*GP*GP*GP*TP*AP*TP*GP*GP*GP*GP*CP*TP*TP*GP*GP*(BRU)P*TP*GP*G)-3' | k | 22 | NA | TTGGGGTATGGGGCTTGGUTGG |
| 5'-D(*CP*CP*AP*AP*CP*CP*AP*AP*GP*CP*CP*CP*CP*AP*TP*AP*CP*CP*CP*CP*AP*A)-3' | d | 22 | NA | CCAACCAAGCCCCATACCCCAA |
| 5'-D(*CP*CP*AP*AP*CP*CP*AP*AP*GP*CP*CP*CP*CP*AP*TP*AP*CP*CP*CP*CP*AP*A)-3' | f | 22 | NA | CCAACCAAGCCCCATACCCCAA |
| 5'-D(*CP*CP*AP*AP*CP*CP*AP*AP*GP*CP*CP*CP*CP*AP*TP*AP*CP*CP*CP*CP*AP*A)-3' | j | 22 | NA | CCAACCAAGCCCCATACCCCAA |
| 5'-D(*CP*CP*AP*AP*CP*CP*AP*AP*GP*CP*CP*CP*CP*AP*TP*AP*CP*CP*CP*CP*AP*A)-3' | l | 22 | NA | CCAACCAAGCCCCATACCCCAA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2013-11-19 Deposition Author(s): Chan, D.C. , Lovely, G.A. , Ngo, H.B. , Phillips, R.