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FASTA Sequence PDB Format mmCIF Format
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4MBY

Structure of b-lymphotropic polyomavirus vp1 in complex with 3'-sialyllactose

PDB DOI: 10.2210/pdb4mby/pdb

Classification: VIRAL PROTEIN
Organism(s): B-Lymphotropic Polyomavirus

Deposited: 2013-08-21
Deposition Author(s): Khan, Z.M. , Neu, U. , Stehle, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.48 Å

4mby
Literature

Structure of b-lymphotropic polyomavirus vp1 in complex with 3'-sialyllactose

Khan, Z.M. , Neu, U. , Stehle, T.

Primary Citation of Related Structures: 4MBY


Proteins
Molecule Chains Sequence Length Organism Sequence
Major Capsid Protein VP1 A 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 B 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 C 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 D 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 E 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 F 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 G 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 H 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 I 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Major Capsid Protein VP1 J 278 B-Lymphotropic Polyomavirus GSHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFSKASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYSETQVWRGLPRYFNVTLRKRIVKNPYP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-08-21
Deposition Author(s): Khan, Z.M. , Neu, U. , Stehle, T.