Crystal structure of cucumber necrosis virus
PDB DOI: 10.2210/pdb4llf/pdb
Classification: VIRUS Organism(s): Cucumber Necrosis Virus
Deposited: 2013-07-09 Deposition Author(s): Smith, T.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein | A | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | B | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | D | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | E | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | F | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | G | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | H | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | I | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | J | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | K | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | L | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | M | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | N | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | O | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Capsid protein | P | 380 | Cucumber Necrosis Virus | MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV |
Method: X-RAY DIFFRACTION
Deposited Date: 2013-07-09 Deposition Author(s): Smith, T.