4LCK
Co-crystal structure of a t-box riboswitch stem i domain in complex with its cognate trna
PDB DOI: 10.2210/pdb4lck/pdb
Classification: RIBOSOMAL PROTEIN/RNA Organism(s): Acetivibrio Thermocellus Dsm1313 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2013-06-21 Deposition Author(s): Ferre-D'Amare, A.R. , Zhang, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2 Å
Co-crystal structure of a t-box riboswitch stem i domain in complex with its cognate trna
Ferre-D'Amare, A.R. , Zhang, J.
Primary Citation of Related Structures: 4LCK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ribosomal protein YbxF | A | 81 | Acetivibrio Thermocellus Dsm1313 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL |
| Ribosomal protein YbxF | D | 81 | Acetivibrio Thermocellus Dsm1313 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| tRNA-Gly | b | 75 | NA | GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC |
| tRNA-Gly | e | 75 | NA | GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC |
| T-BOX RIBOSWITCH STEM I | c | 102 | NA | GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC |
| T-BOX RIBOSWITCH STEM I | f | 102 | NA | GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2013-06-21 Deposition Author(s): Ferre-D'Amare, A.R. , Zhang, J.