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FASTA Sequence PDB Format mmCIF Format
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4KPF

Novel fluoroquinolones in complex with topoisomerase iv from s. pneumoniae and e-site g-gate

PDB DOI: 10.2210/pdb4kpf/pdb

Classification: ISOMERASE/DNA/INHIBITOR
Organism(s): Streptococcus Pneumoniae , Synthetic Construct

Deposited: 2013-05-13
Deposition Author(s): Cirz, R.T. , Fisher, L.M. , Laponogov, I. , Moser, H.E. , Pan, X.-S. , Sanderson, M.R. , Vesekov, D.A. , Wagman, A.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.24 Å

4kpf
Literature

Novel fluoroquinolones in complex with topoisomerase iv from s. pneumoniae and e-site g-gate

Cirz, R.T. , Fisher, L.M. , Laponogov, I. , Moser, H.E. , Pan, X.-S. , Sanderson, M.R. , Vesekov, D.A. , Wagman, A.S.

Primary Citation of Related Structures: 4KPF


Proteins
Molecule Chains Sequence Length Organism Sequence
ParC55 A 496 Streptococcus Pneumoniae , Synthetic Construct MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKALEHHHHHH
ParC55 B 496 Streptococcus Pneumoniae , Synthetic Construct MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKALEHHHHHH
ParE30 C 268 Streptococcus Pneumoniae , Synthetic Construct MGHHHHHHHHHHSSGHIDDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEEATVF
ParE30 D 268 Streptococcus Pneumoniae , Synthetic Construct MGHHHHHHHHHHSSGHIDDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEEATVF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
E-site1 e 7 NA CATGAAT
E-site2 f 11 NA AGTCATTCATG
E-site3 g 7 NA CGTGCAT
E-site4 h 11 NA GACTATGCACG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-05-13
Deposition Author(s): Cirz, R.T. , Fisher, L.M. , Laponogov, I. , Moser, H.E. , Pan, X.-S. , Sanderson, M.R. , Vesekov, D.A. , Wagman, A.S.