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FASTA Sequence PDB Format mmCIF Format
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4KOE

Quinolone(trovafloxacin)-dna cleavage complex of type iv topoisomerase from s. pneumoniae

PDB DOI: 10.2210/pdb4koe/pdb

Classification: ISOMERASE/DNA/INHIBITOR
Organism(s): Streptococcus Pneumoniae , Streptococcus Pneumoniae Serotype 4 , Synthetic Construct

Deposited: 2013-05-11
Deposition Author(s): Fisher, L.M. , Laponogov, I. , Pan, X.-S. , Sanderson, M.R. , Veselkov, D.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.02 Å

4koe
Literature

Quinolone(trovafloxacin)-dna cleavage complex of type iv topoisomerase from s. pneumoniae

Fisher, L.M. , Laponogov, I. , Pan, X.-S. , Sanderson, M.R. , Veselkov, D.A.

Primary Citation of Related Structures: 4KOE


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA topoisomerase 4 subunit A A 496 Streptococcus Pneumoniae , Streptococcus Pneumoniae Serotype 4 , Synthetic Construct MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKALEHHHHHH
DNA topoisomerase 4 subunit A B 496 Streptococcus Pneumoniae , Streptococcus Pneumoniae Serotype 4 , Synthetic Construct MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKALEHHHHHH
DNA topoisomerase 4 subunit B C 268 Streptococcus Pneumoniae , Streptococcus Pneumoniae Serotype 4 , Synthetic Construct MGHHHHHHHHHHSSGHIDDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEEATVF
DNA topoisomerase 4 subunit B D 268 Streptococcus Pneumoniae , Streptococcus Pneumoniae Serotype 4 , Synthetic Construct MGHHHHHHHHHHSSGHIDDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEEATVF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
E-site DNA1 e 7 NA CATGAAT
E-site DNA2 f 11 NA AGTCATTCATG
E-site DNA3 g 7 NA CGTGCAT
E-site DNA4 h 11 NA GACTATGCACG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-05-11
Deposition Author(s): Fisher, L.M. , Laponogov, I. , Pan, X.-S. , Sanderson, M.R. , Veselkov, D.A.