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4IRK

Structure of polymerase-dna complex, dna

PDB DOI: 10.2210/pdb4irk/pdb

Classification: Transferase/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2013-01-14
Deposition Author(s): Nair, D.T. , Sharma, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.32 Å

Literature

Structure of polymerase-dna complex, dna

Nair, D.T. , Sharma, A.

Primary Citation of Related Structures: 4IRK


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV B 342 Escherichia Coli , Synthetic Construct GSRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALALCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDP
DNA polymerase IV A 342 Escherichia Coli , Synthetic Construct GSRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALALCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3') c 18 NA TCTAGGGTCCTAGGACCC
DNA (5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3') f 18 NA TCTAGGGTCCTAGGACCC
DNA (5'-D(*CP*TP*A*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3') g 17 NA CTAGGGTCCTAGGACCC
DNA (5'-D(*CP*TP*A*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3') h 17 NA CTAGGGTCCTAGGACCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-01-14
Deposition Author(s): Nair, D.T. , Sharma, A.